Gene
RNA
| Item | Value |
|---|---|
| gene id | G1408911 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 73812716 ~ 73812961 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: serine/arginine repetitive matrix protein 1-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1609540 | True | 212 | lncRNA | 0.50 | 2 | 73812716 | 73812961 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ppdpfb | LOC106566296 | coding | downstream | 35284 | 73769856 ~ 73777432 (-) |
| LOC110492449 | LOC106572884 | coding | downstream | 70620 | 73710129 ~ 73742096 (-) |
| LOC118939590 | NA | coding | downstream | 576101 | 73222996 ~ 73236615 (-) |
| LOC110492609 | LOC106566381 | coding | downstream | 645323 | 73147296 ~ 73167393 (-) |
| LOC110491162 | LOC106566379 | coding | downstream | 668428 | 73115423 ~ 73144288 (-) |
| LOC110492453 | LOC106566293 | coding | upstream | 19907 | 73832868 ~ 73867578 (-) |
| lama5 | lama5 | coding | upstream | 66227 | 73879188 ~ 74155898 (-) |
| rps21 | LOC106572905 | coding | upstream | 359998 | 74172873 ~ 74182639 (-) |
| LOC118939593 | NA | coding | upstream | 370219 | 74183180 ~ 74197780 (-) |
| LOC118939594 | NA | coding | upstream | 401567 | 74214528 ~ 74217266 (-) |
| G1408906 | NA | non-coding | downstream | 8562 | 73801510 ~ 73804154 (-) |
| G1408907 | NA | non-coding | downstream | 8800 | 73802081 ~ 73803916 (-) |
| G1408904 | NA | non-coding | downstream | 22550 | 73789895 ~ 73790166 (-) |
| G1408900 | NA | non-coding | downstream | 33081 | 73779363 ~ 73779635 (-) |
| G1408880 | NA | non-coding | downstream | 81496 | 73730640 ~ 73731220 (-) |
| G1408946 | NA | non-coding | upstream | 170258 | 73983219 ~ 73983984 (-) |
| G1408953 | NA | non-coding | upstream | 194701 | 74007662 ~ 74008368 (-) |
| G1408955 | NA | non-coding | upstream | 201246 | 74014207 ~ 74014553 (-) |
| G1408990 | NA | non-coding | upstream | 281450 | 74094411 ~ 74094682 (-) |
| G1409027 | NA | non-coding | upstream | 348262 | 74161223 ~ 74161456 (-) |
| G1408615 | NA | other | downstream | 579762 | 73230812 ~ 73232954 (-) |
| G1407755 | NA | other | downstream | 1374869 | 72435429 ~ 72437847 (-) |
| G1407628 | NA | other | downstream | 1480001 | 72331806 ~ 72332715 (-) |
| G1406760 | NA | other | downstream | 2269247 | 71539958 ~ 71543469 (-) |
| G1409044 | NA | other | upstream | 382564 | 74195525 ~ 74195951 (-) |
| G1409407 | NA | other | upstream | 923472 | 74736433 ~ 74739189 (-) |
| G1409430 | LOC106566333 | other | upstream | 1032143 | 74845104 ~ 74847937 (-) |
| G1409847 | NA | other | upstream | 1555929 | 75368890 ~ 75369623 (-) |
