G1409166



Basic Information


Item Value
gene id G1409166
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 74299542 ~ 74300391 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1609831
attcagcatttccctgtaaggtctacctacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcatcatttccctgtaaggtctacctacacctgttgtattcagcatttccctgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctacctacacctgttgtattcagcatttccctgtaaggtctactacacctgttgtattcagcatttccctgtaaggtctacctacacctgtggtattcggcgcatttaacaaataaaatttgatttgatataatagAGCCGTGTGTTGTTGTGGTCAGGTCAGATCAACCTC

Function


GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU1609831 True 462 lncRNA 0.41 3 74299542 74300391

Neighbor


gene id symbol gene type direction distance location
LOC118939594 NA coding downstream 82276 74214528 ~ 74217266 (-)
LOC118939593 NA coding downstream 101762 74183180 ~ 74197780 (-)
rps21 LOC106572905 coding downstream 116903 74172873 ~ 74182639 (-)
lama5 lama5 coding downstream 143644 73879188 ~ 74155898 (-)
LOC110492453 LOC106566293 coding downstream 431964 73832868 ~ 73867578 (-)
ccm2l ccm2l coding upstream 38864 74339255 ~ 74374071 (-)
LOC110518683 LOC105027955 coding upstream 87549 74387940 ~ 74450972 (-)
LOC110512152 LOC106566317 coding upstream 357407 74657798 ~ 74757404 (-)
LOC118939467 NA coding upstream 600096 74900487 ~ 74905798 (-)
LOC110492703 LOC106566343 coding upstream 624372 74922068 ~ 74984835 (-)
G1409153 NA non-coding downstream 40134 74258809 ~ 74259408 (-)
G1409150 NA non-coding downstream 45332 74253338 ~ 74254210 (-)
G1409148 NA non-coding downstream 66169 74230904 ~ 74233373 (-)
G1409053 NA non-coding downstream 97054 74202116 ~ 74202488 (-)
G1409039 NA non-coding downstream 111188 74188153 ~ 74188354 (-)
G1409172 NA non-coding upstream 7320 74307711 ~ 74308354 (-)
G1409173 NA non-coding upstream 8761 74309152 ~ 74311291 (-)
G1409176 NA non-coding upstream 13284 74313675 ~ 74313958 (-)
G1409177 NA non-coding upstream 22627 74323018 ~ 74326443 (-)
G1409228 NA non-coding upstream 138944 74439335 ~ 74439623 (-)
G1409044 NA other downstream 103591 74195525 ~ 74195951 (-)
ppdpfb LOC106566296 other downstream 522185 73769856 ~ 73777432 (-)
G1408615 NA other downstream 1066588 73230812 ~ 73232954 (-)
G1407755 NA other downstream 1861695 72435429 ~ 72437847 (-)
G1409407 NA other upstream 436042 74736433 ~ 74739189 (-)
G1409430 LOC106566333 other upstream 544713 74845104 ~ 74847937 (-)
G1409847 NA other upstream 1068499 75368890 ~ 75369623 (-)
G1409928 NA other upstream 1134663 75435054 ~ 75435540 (-)
G1410190 NA other upstream 1455387 75755742 ~ 75756479 (-)

Expression



Co-expression Network