Gene
RNA
| Item | Value |
|---|---|
| gene id | G1409230 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 74444632 ~ 74444855 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| proline-rich 33 kDa extensin-related protein-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1609912 | True | 224 | lncRNA | 0.54 | 1 | 74444632 | 74444855 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ccm2l | ccm2l | coding | downstream | 70561 | 74339255 ~ 74374071 (-) |
| LOC110510377 | cables2 | coding | downstream | 113523 | 74217320 ~ 74331109 (-) |
| LOC118939594 | NA | coding | downstream | 227366 | 74214528 ~ 74217266 (-) |
| LOC118939593 | NA | coding | downstream | 246852 | 74183180 ~ 74197780 (-) |
| rps21 | LOC106572905 | coding | downstream | 261993 | 74172873 ~ 74182639 (-) |
| LOC110512152 | LOC106566317 | coding | upstream | 212943 | 74657798 ~ 74757404 (-) |
| LOC118939467 | NA | coding | upstream | 455632 | 74900487 ~ 74905798 (-) |
| LOC110492703 | LOC106566343 | coding | upstream | 479908 | 74922068 ~ 74984835 (-) |
| irak1 | LOC106566344 | coding | upstream | 541770 | 74986625 ~ 75015379 (-) |
| LOC110491183 | LOC106566345 | coding | upstream | 584752 | 75029607 ~ 75046973 (-) |
| G1409228 | NA | non-coding | downstream | 5009 | 74439335 ~ 74439623 (-) |
| G1409177 | NA | non-coding | downstream | 118189 | 74323018 ~ 74326443 (-) |
| G1409176 | NA | non-coding | downstream | 130674 | 74313675 ~ 74313958 (-) |
| G1409173 | NA | non-coding | downstream | 133341 | 74309152 ~ 74311291 (-) |
| G1409172 | NA | non-coding | downstream | 136278 | 74307711 ~ 74308354 (-) |
| G1409232 | NA | non-coding | upstream | 3149 | 74448004 ~ 74448233 (-) |
| G1409233 | NA | non-coding | upstream | 3401 | 74448256 ~ 74448499 (-) |
| G1409255 | NA | non-coding | upstream | 67327 | 74512182 ~ 74512475 (-) |
| G1409273 | NA | non-coding | upstream | 69540 | 74514395 ~ 74584144 (-) |
| G1409277 | NA | non-coding | upstream | 76877 | 74521732 ~ 74522434 (-) |
| G1409044 | NA | other | downstream | 248681 | 74195525 ~ 74195951 (-) |
| ppdpfb | LOC106566296 | other | downstream | 667275 | 73769856 ~ 73777432 (-) |
| G1408615 | NA | other | downstream | 1211678 | 73230812 ~ 73232954 (-) |
| G1407755 | NA | other | downstream | 2006785 | 72435429 ~ 72437847 (-) |
| G1409407 | NA | other | upstream | 291578 | 74736433 ~ 74739189 (-) |
| G1409430 | LOC106566333 | other | upstream | 400249 | 74845104 ~ 74847937 (-) |
| G1409847 | NA | other | upstream | 924035 | 75368890 ~ 75369623 (-) |
| G1409928 | NA | other | upstream | 990199 | 75435054 ~ 75435540 (-) |
| G1410190 | NA | other | upstream | 1310923 | 75755742 ~ 75756479 (-) |
