Gene
RNA
| Item | Value |
|---|---|
| gene id | G1409293 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 74600711 ~ 74601209 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1609992 | True | 499 | lncRNA | 0.43 | 1 | 74600711 | 74601209 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110518683 | LOC105027955 | coding | downstream | 149739 | 74387940 ~ 74450972 (-) |
| ccm2l | ccm2l | coding | downstream | 226640 | 74339255 ~ 74374071 (-) |
| LOC110510377 | cables2 | coding | downstream | 269602 | 74217320 ~ 74331109 (-) |
| LOC118939594 | NA | coding | downstream | 383445 | 74214528 ~ 74217266 (-) |
| LOC118939593 | NA | coding | downstream | 402931 | 74183180 ~ 74197780 (-) |
| LOC110512152 | LOC106566317 | coding | upstream | 56589 | 74657798 ~ 74757404 (-) |
| LOC118939467 | NA | coding | upstream | 299278 | 74900487 ~ 74905798 (-) |
| LOC110492703 | LOC106566343 | coding | upstream | 323554 | 74922068 ~ 74984835 (-) |
| irak1 | LOC106566344 | coding | upstream | 385416 | 74986625 ~ 75015379 (-) |
| LOC110491183 | LOC106566345 | coding | upstream | 428398 | 75029607 ~ 75046973 (-) |
| G1409287 | NA | non-coding | downstream | 4600 | 74592217 ~ 74596111 (-) |
| G1409279 | NA | non-coding | downstream | 5722 | 74562923 ~ 74594989 (-) |
| G1409273 | NA | non-coding | downstream | 16567 | 74514395 ~ 74584144 (-) |
| G1409277 | NA | non-coding | downstream | 78277 | 74521732 ~ 74522434 (-) |
| G1409255 | NA | non-coding | downstream | 88236 | 74512182 ~ 74512475 (-) |
| G1409295 | NA | non-coding | upstream | 34837 | 74636046 ~ 74636305 (-) |
| G1409397 | NA | non-coding | upstream | 105392 | 74706601 ~ 74708680 (-) |
| G1409401 | NA | non-coding | upstream | 117544 | 74718753 ~ 74719203 (-) |
| G1409403 | NA | non-coding | upstream | 122439 | 74723648 ~ 74724176 (-) |
| G1409408 | NA | non-coding | upstream | 138151 | 74739360 ~ 74739876 (-) |
| G1409044 | NA | other | downstream | 404760 | 74195525 ~ 74195951 (-) |
| rps21 | LOC106572905 | other | downstream | 418131 | 74172873 ~ 74182639 (-) |
| ppdpfb | LOC106566296 | other | downstream | 823354 | 73769856 ~ 73777432 (-) |
| G1408615 | NA | other | downstream | 1367757 | 73230812 ~ 73232954 (-) |
| G1407755 | NA | other | downstream | 2162864 | 72435429 ~ 72437847 (-) |
| G1409407 | NA | other | upstream | 135224 | 74736433 ~ 74739189 (-) |
| G1409430 | LOC106566333 | other | upstream | 243895 | 74845104 ~ 74847937 (-) |
| G1409847 | NA | other | upstream | 767681 | 75368890 ~ 75369623 (-) |
| G1409928 | NA | other | upstream | 833845 | 75435054 ~ 75435540 (-) |
| G1410190 | NA | other | upstream | 1154569 | 75755742 ~ 75756479 (-) |
