Gene
RNA
| Item | Value |
|---|---|
| gene id | G1409401 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 74718753 ~ 74719203 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1610155 | True | 335 | lncRNA | 0.55 | 2 | 74718753 | 74719203 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110518683 | LOC105027955 | coding | downstream | 267781 | 74387940 ~ 74450972 (-) |
| ccm2l | ccm2l | coding | downstream | 344682 | 74339255 ~ 74374071 (-) |
| LOC110510377 | cables2 | coding | downstream | 387644 | 74217320 ~ 74331109 (-) |
| LOC118939594 | NA | coding | downstream | 501487 | 74214528 ~ 74217266 (-) |
| LOC118939593 | NA | coding | downstream | 520973 | 74183180 ~ 74197780 (-) |
| LOC118939467 | NA | coding | upstream | 181284 | 74900487 ~ 74905798 (-) |
| LOC110492703 | LOC106566343 | coding | upstream | 205560 | 74922068 ~ 74984835 (-) |
| irak1 | LOC106566344 | coding | upstream | 267422 | 74986625 ~ 75015379 (-) |
| LOC110491183 | LOC106566345 | coding | upstream | 310404 | 75029607 ~ 75046973 (-) |
| LOC118939468 | NA | coding | upstream | 652417 | 75371620 ~ 75372905 (-) |
| G1409397 | NA | non-coding | downstream | 10073 | 74706601 ~ 74708680 (-) |
| G1409295 | NA | non-coding | downstream | 82448 | 74636046 ~ 74636305 (-) |
| G1409293 | NA | non-coding | downstream | 117544 | 74600711 ~ 74601209 (-) |
| G1409287 | NA | non-coding | downstream | 122642 | 74592217 ~ 74596111 (-) |
| G1409279 | NA | non-coding | downstream | 123764 | 74562923 ~ 74594989 (-) |
| G1409403 | NA | non-coding | upstream | 4445 | 74723648 ~ 74724176 (-) |
| G1409408 | NA | non-coding | upstream | 20157 | 74739360 ~ 74739876 (-) |
| G1409419 | NA | non-coding | upstream | 41748 | 74760951 ~ 74761346 (-) |
| G1409420 | NA | non-coding | upstream | 43407 | 74762610 ~ 74770849 (-) |
| G1409421 | NA | non-coding | upstream | 48919 | 74768122 ~ 74770138 (-) |
| G1409044 | NA | other | downstream | 522802 | 74195525 ~ 74195951 (-) |
| rps21 | LOC106572905 | other | downstream | 536173 | 74172873 ~ 74182639 (-) |
| ppdpfb | LOC106566296 | other | downstream | 941396 | 73769856 ~ 73777432 (-) |
| G1408615 | NA | other | downstream | 1485799 | 73230812 ~ 73232954 (-) |
| G1407755 | NA | other | downstream | 2280906 | 72435429 ~ 72437847 (-) |
| G1409407 | NA | other | upstream | 17230 | 74736433 ~ 74739189 (-) |
| G1409430 | LOC106566333 | other | upstream | 125901 | 74845104 ~ 74847937 (-) |
| G1409847 | NA | other | upstream | 649687 | 75368890 ~ 75369623 (-) |
| G1409928 | NA | other | upstream | 715851 | 75435054 ~ 75435540 (-) |
| G1410190 | NA | other | upstream | 1036575 | 75755742 ~ 75756479 (-) |
