XLOC_003309 (BX000700.4)



Basic Information


Item Value
gene id XLOC_003309
gene name BX000700.4
gene type misc
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 12542039 ~ 12542334 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00006484
gccagggccgaatttttgtcccagtccgcccctgactgGGAGGCTGAGGCTGCGGATCGCTTGAGCTCAAGGCTTCTGGACTGCAGTGGACTATGTCGATCGGGTGCCCACACTAAGTTCGGTATCAATATGGTGCACCTGGGTGAGCTTGGGACCGCCAGGTCGTTAAAGGAGGAGTGAACCGGCCCAGGTCGGAAACGGAGCAGGTCAAAGCTCCCGTGCCGATCAGTAGTGGGATCGTGCCTGTGAATAGACACTTCAGTTCAGCCTGAgcgacacagagagacgcagacttt

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000109379

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00006484 True 296 misc_RNA 0.58 1 12542039 12542334

Neighbor


gene id symbol gene type direction distance location
XLOC_003307 NA coding upstream 19010 12522770 ~ 12523029 (+)
XLOC_003304 NA coding upstream 47862 12493872 ~ 12494177 (+)
XLOC_003302 NA coding upstream 74979 12466766 ~ 12467060 (+)
XLOC_003284 si:ch211-156l18.7 coding upstream 357496 12175162 ~ 12184543 (+)
XLOC_003282 NA coding upstream 375249 12166486 ~ 12166790 (+)
XLOC_003319 NA coding downstream 175775 12718109 ~ 12718402 (+)
XLOC_003320 ap1s2 coding downstream 177610 12719944 ~ 12728353 (+)
XLOC_003321 rbb4l coding downstream 202241 12744575 ~ 12770546 (+)
XLOC_003322 NA coding downstream 239881 12782215 ~ 12785059 (+)
XLOC_003323 rtel1 coding downstream 269572 12811906 ~ 12859263 (+)
XLOC_003308 BX000700.26 misc upstream 5459 12536284 ~ 12536580 (+)
XLOC_003306 BX000700.25 misc upstream 24810 12516933 ~ 12517229 (+)
XLOC_003305 BX000700.11 misc upstream 39192 12502551 ~ 12502847 (+)
XLOC_003303 BX000700.1 misc upstream 66337 12475442 ~ 12475702 (+)
XLOC_003301 BX000700.13 misc upstream 101087 12440656 ~ 12440952 (+)
XLOC_003310 CABZ01022569.4 misc downstream 25653 12567987 ~ 12568283 (+)
XLOC_003311 CABZ01022569.5 misc downstream 36198 12578532 ~ 12578828 (+)
XLOC_003312 CABZ01022569.3 misc downstream 51237 12593571 ~ 12593867 (+)
XLOC_003313 CR450764.2 misc downstream 64742 12607076 ~ 12607370 (+)
XLOC_003314 CR450764.9 misc downstream 81221 12623555 ~ 12623851 (+)
XLOC_003278 NA non-coding upstream 638529 11891240 ~ 11903510 (+)
XLOC_003329 CR847923.1 non-coding downstream 609585 13151919 ~ 13152385 (+)
XLOC_003332 NA non-coding downstream 651389 13193723 ~ 13194597 (+)
XLOC_003341 CR555295.2 non-coding downstream 1275235 13817569 ~ 13817684 (+)

Expression



Co-expression Network