Gene
RNA
| Item | Value |
|---|---|
| gene id | G1409423 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 74777507 ~ 74778567 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1610247 | False | 449 | lncRNA | 0.47 | 3 | 74777507 | 74778567 |
| TU1610249 | True | 324 | lncRNA | 0.47 | 2 | 74778040 | 74778567 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110512152 | LOC106566317 | coding | downstream | 20103 | 74657798 ~ 74757404 (-) |
| LOC110518683 | LOC105027955 | coding | downstream | 326535 | 74387940 ~ 74450972 (-) |
| ccm2l | ccm2l | coding | downstream | 403436 | 74339255 ~ 74374071 (-) |
| LOC110510377 | cables2 | coding | downstream | 446398 | 74217320 ~ 74331109 (-) |
| LOC118939594 | NA | coding | downstream | 560241 | 74214528 ~ 74217266 (-) |
| LOC118939467 | NA | coding | upstream | 121920 | 74900487 ~ 74905798 (-) |
| LOC110492703 | LOC106566343 | coding | upstream | 146196 | 74922068 ~ 74984835 (-) |
| irak1 | LOC106566344 | coding | upstream | 208058 | 74986625 ~ 75015379 (-) |
| LOC110491183 | LOC106566345 | coding | upstream | 251040 | 75029607 ~ 75046973 (-) |
| LOC118939468 | NA | coding | upstream | 593053 | 75371620 ~ 75372905 (-) |
| G1409420 | NA | non-coding | downstream | 6658 | 74762610 ~ 74770849 (-) |
| G1409421 | NA | non-coding | downstream | 7369 | 74768122 ~ 74770138 (-) |
| G1409419 | NA | non-coding | downstream | 16161 | 74760951 ~ 74761346 (-) |
| G1409408 | NA | non-coding | downstream | 37631 | 74739360 ~ 74739876 (-) |
| G1409403 | NA | non-coding | downstream | 53331 | 74723648 ~ 74724176 (-) |
| G1409441 | NA | non-coding | upstream | 44999 | 74823566 ~ 74823779 (-) |
| G1409430 | LOC106566333 | non-coding | upstream | 66537 | 74845104 ~ 74847937 (-) |
| G1409450 | NA | non-coding | upstream | 99510 | 74878077 ~ 74878695 (-) |
| G1409457 | NA | non-coding | upstream | 109243 | 74887810 ~ 74888030 (-) |
| G1409469 | NA | non-coding | upstream | 117936 | 74896503 ~ 74896983 (-) |
| G1409407 | NA | other | downstream | 38318 | 74736433 ~ 74739189 (-) |
| G1409044 | NA | other | downstream | 581556 | 74195525 ~ 74195951 (-) |
| rps21 | LOC106572905 | other | downstream | 594927 | 74172873 ~ 74182639 (-) |
| ppdpfb | LOC106566296 | other | downstream | 1000150 | 73769856 ~ 73777432 (-) |
| G1408615 | NA | other | downstream | 1544553 | 73230812 ~ 73232954 (-) |
| G1409847 | NA | other | upstream | 590323 | 75368890 ~ 75369623 (-) |
| G1409928 | NA | other | upstream | 656487 | 75435054 ~ 75435540 (-) |
| G1410190 | NA | other | upstream | 977211 | 75755742 ~ 75756479 (-) |
| G1410213 | NA | other | upstream | 1085262 | 75807474 ~ 75864456 (-) |
