Gene
RNA
| Item | Value |
|---|---|
| gene id | G1409457 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 74887810 ~ 74888030 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1610299 | True | 221 | lncRNA | 0.33 | 1 | 74887810 | 74888030 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110512152 | LOC106566317 | coding | downstream | 130406 | 74657798 ~ 74757404 (-) |
| LOC110518683 | LOC105027955 | coding | downstream | 436838 | 74387940 ~ 74450972 (-) |
| ccm2l | ccm2l | coding | downstream | 513739 | 74339255 ~ 74374071 (-) |
| LOC110510377 | cables2 | coding | downstream | 556701 | 74217320 ~ 74331109 (-) |
| LOC118939594 | NA | coding | downstream | 670544 | 74214528 ~ 74217266 (-) |
| LOC118939467 | NA | coding | upstream | 12457 | 74900487 ~ 74905798 (-) |
| LOC110492703 | LOC106566343 | coding | upstream | 36733 | 74922068 ~ 74984835 (-) |
| irak1 | LOC106566344 | coding | upstream | 98595 | 74986625 ~ 75015379 (-) |
| LOC110491183 | LOC106566345 | coding | upstream | 141577 | 75029607 ~ 75046973 (-) |
| LOC118939468 | NA | coding | upstream | 483590 | 75371620 ~ 75372905 (-) |
| G1409450 | NA | non-coding | downstream | 9115 | 74878077 ~ 74878695 (-) |
| G1409430 | LOC106566333 | non-coding | downstream | 39873 | 74845104 ~ 74847937 (-) |
| G1409441 | NA | non-coding | downstream | 64031 | 74823566 ~ 74823779 (-) |
| G1409423 | NA | non-coding | downstream | 109243 | 74777507 ~ 74778567 (-) |
| G1409420 | NA | non-coding | downstream | 116961 | 74762610 ~ 74770849 (-) |
| G1409469 | NA | non-coding | upstream | 8473 | 74896503 ~ 74896983 (-) |
| G1409742 | NA | non-coding | upstream | 15716 | 74903746 ~ 74903971 (-) |
| G1409768 | NA | non-coding | upstream | 83294 | 74971324 ~ 74973934 (-) |
| G1409407 | NA | other | downstream | 148621 | 74736433 ~ 74739189 (-) |
| G1409044 | NA | other | downstream | 691859 | 74195525 ~ 74195951 (-) |
| rps21 | LOC106572905 | other | downstream | 705230 | 74172873 ~ 74182639 (-) |
| ppdpfb | LOC106566296 | other | downstream | 1110453 | 73769856 ~ 73777432 (-) |
| G1409847 | NA | other | upstream | 480860 | 75368890 ~ 75369623 (-) |
| G1409928 | NA | other | upstream | 547024 | 75435054 ~ 75435540 (-) |
| G1410190 | NA | other | upstream | 867748 | 75755742 ~ 75756479 (-) |
| G1410213 | NA | other | upstream | 975799 | 75807474 ~ 75864456 (-) |
| G1410288 | NA | other | upstream | 1052677 | 75940707 ~ 75941802 (-) |
