Gene
RNA
| Item | Value |
|---|---|
| gene id | G1409469 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 74896503 ~ 74896983 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1610311 | True | 427 | lncRNA | 0.42 | 2 | 74896503 | 74896983 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110512152 | LOC106566317 | coding | downstream | 139099 | 74657798 ~ 74757404 (-) |
| LOC110518683 | LOC105027955 | coding | downstream | 445531 | 74387940 ~ 74450972 (-) |
| ccm2l | ccm2l | coding | downstream | 522432 | 74339255 ~ 74374071 (-) |
| LOC110510377 | cables2 | coding | downstream | 565394 | 74217320 ~ 74331109 (-) |
| LOC118939594 | NA | coding | downstream | 679237 | 74214528 ~ 74217266 (-) |
| LOC118939467 | NA | coding | upstream | 3504 | 74900487 ~ 74905798 (-) |
| LOC110492703 | LOC106566343 | coding | upstream | 27780 | 74922068 ~ 74984835 (-) |
| irak1 | LOC106566344 | coding | upstream | 89642 | 74986625 ~ 75015379 (-) |
| LOC110491183 | LOC106566345 | coding | upstream | 132624 | 75029607 ~ 75046973 (-) |
| LOC118939468 | NA | coding | upstream | 474637 | 75371620 ~ 75372905 (-) |
| G1409457 | NA | non-coding | downstream | 8473 | 74887810 ~ 74888030 (-) |
| G1409450 | NA | non-coding | downstream | 17808 | 74878077 ~ 74878695 (-) |
| G1409430 | LOC106566333 | non-coding | downstream | 48566 | 74845104 ~ 74847937 (-) |
| G1409441 | NA | non-coding | downstream | 72724 | 74823566 ~ 74823779 (-) |
| G1409423 | NA | non-coding | downstream | 117936 | 74777507 ~ 74778567 (-) |
| G1409742 | NA | non-coding | upstream | 6763 | 74903746 ~ 74903971 (-) |
| G1409768 | NA | non-coding | upstream | 74341 | 74971324 ~ 74973934 (-) |
| G1409769 | NA | non-coding | upstream | 76112 | 74973095 ~ 74973566 (-) |
| G1409407 | NA | other | downstream | 157314 | 74736433 ~ 74739189 (-) |
| G1409044 | NA | other | downstream | 700552 | 74195525 ~ 74195951 (-) |
| rps21 | LOC106572905 | other | downstream | 713923 | 74172873 ~ 74182639 (-) |
| ppdpfb | LOC106566296 | other | downstream | 1119146 | 73769856 ~ 73777432 (-) |
| G1409847 | NA | other | upstream | 471907 | 75368890 ~ 75369623 (-) |
| G1409928 | NA | other | upstream | 538071 | 75435054 ~ 75435540 (-) |
| G1410190 | NA | other | upstream | 858795 | 75755742 ~ 75756479 (-) |
| G1410213 | NA | other | upstream | 966846 | 75807474 ~ 75864456 (-) |
| G1410288 | NA | other | upstream | 1043724 | 75940707 ~ 75941802 (-) |
