Gene
RNA
| Item | Value |
|---|---|
| gene id | G1409768 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 74971324 ~ 74973934 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1610713 | True | 201 | lncRNA | 0.55 | 2 | 74971324 | 74973934 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118939467 | NA | coding | downstream | 65526 | 74900487 ~ 74905798 (-) |
| LOC110512152 | LOC106566317 | coding | downstream | 213920 | 74657798 ~ 74757404 (-) |
| LOC110518683 | LOC105027955 | coding | downstream | 520352 | 74387940 ~ 74450972 (-) |
| ccm2l | ccm2l | coding | downstream | 597253 | 74339255 ~ 74374071 (-) |
| LOC110510377 | cables2 | coding | downstream | 640215 | 74217320 ~ 74331109 (-) |
| irak1 | LOC106566344 | coding | upstream | 12691 | 74986625 ~ 75015379 (-) |
| LOC110491183 | LOC106566345 | coding | upstream | 55673 | 75029607 ~ 75046973 (-) |
| LOC118939468 | NA | coding | upstream | 397686 | 75371620 ~ 75372905 (-) |
| LOC110492917 | LOC106566358 | coding | upstream | 626100 | 75600034 ~ 75615122 (-) |
| LOC110492699 | tcea2 | coding | upstream | 1130275 | 76104209 ~ 76119590 (-) |
| LOC110492703 | LOC106566343 | non-coding | downstream | 43310 | 74922068 ~ 74984835 (-) |
| G1409742 | NA | non-coding | downstream | 67353 | 74903746 ~ 74903971 (-) |
| G1409469 | NA | non-coding | downstream | 74341 | 74896503 ~ 74896983 (-) |
| G1409457 | NA | non-coding | downstream | 83294 | 74887810 ~ 74888030 (-) |
| G1409772 | NA | non-coding | upstream | 20912 | 74994846 ~ 74995261 (-) |
| G1409752 | NA | non-coding | upstream | 43679 | 75017613 ~ 75024741 (-) |
| G1409794 | NA | non-coding | upstream | 88254 | 75062188 ~ 75062682 (-) |
| G1409806 | NA | non-coding | upstream | 115193 | 75089127 ~ 75090666 (-) |
| G1409816 | NA | non-coding | upstream | 141799 | 75115733 ~ 75115957 (-) |
| G1409430 | LOC106566333 | other | downstream | 123387 | 74845104 ~ 74847937 (-) |
| G1409407 | NA | other | downstream | 232135 | 74736433 ~ 74739189 (-) |
| G1409044 | NA | other | downstream | 775373 | 74195525 ~ 74195951 (-) |
| rps21 | LOC106572905 | other | downstream | 788744 | 74172873 ~ 74182639 (-) |
| ppdpfb | LOC106566296 | other | downstream | 1193967 | 73769856 ~ 73777432 (-) |
| G1409847 | NA | other | upstream | 394956 | 75368890 ~ 75369623 (-) |
| G1409928 | NA | other | upstream | 461120 | 75435054 ~ 75435540 (-) |
| G1410190 | NA | other | upstream | 781844 | 75755742 ~ 75756479 (-) |
| G1410213 | NA | other | upstream | 889895 | 75807474 ~ 75864456 (-) |
| G1410288 | NA | other | upstream | 966773 | 75940707 ~ 75941802 (-) |
