G1409806


Basic Information

Item Value
gene id G1409806
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 75089127 ~ 75090666 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1610758
TACAGTTTATATTCCACCTCATAGTGATTCATCTACAGTTTCTATTCCACCTCATAGTGATTCATCTACAGTTTCTATTCCACCTCATAGTGATCCATCTACAGTTTATATTCCACCTCATAGTGATCCATCTACAGTTTCTATTCCACCTCATAGTGATTCATCTACAGTTTATATTCCACCTCATAGTGATTCATCTACAGTTTATATTCCACCTCATAGTGATTCATCTACAGTTTATATTCCACCTCATAGTGATTCATCTACAGTTTATATTCCACCTCATTGTGATCCATCTACAGTTTATATTCCACCTCATAGTGATTCATCTACAGTTTATATTCCACCTCATAGTGATCCATCTACAGTTTATATTCCACCTCATAGTGATTCATCTACAGTTTATATTCCACCTCATAGTGATCCATCTACTTGTTTCTATTCCACCTCATTGTGATCCATTCACCATCTACAGTTTCTATTCCACCTCATAGTGATCCATCTACAGTTTATATTCCACCTCATAGTGATCCATCTACAGTTTATATTCCACCTCATAGTGATCCATCTACAGTTTATATTCCACCTCATAGTTATCCATCTACAGTTTATATTCCACCTCATAGTGATTCATCTACAGTTTATATTCCACCTCATAGTGATCCATCTACAGTTTATATTCCACCTCATAGTGATTCATCTACAGTTTATGTTCCACCTCATAGTGATCCATCTAAAGTTTATATTCCACCTCATAGTGATCCATCTACAGTTTATATTCGACCTCATAGTGATTCATCTACAGTTTATATTCCACCTCATAGTGATTCATCTACAGTTTATATTCCACCTCATAGTGATCCATCTACAGTTTATATTCCACCTCATAGTGATTCATCTACAGTTTATATTCCACCTCATAGTGATTCATCTACAGTTTATATTCCACCTCATTGTGATTCATCTACAGTTTATATTCCACCTCATAGTGATCCATCTACAGTTTATATTCCACCTCATAGTG

Function

NR:

description
PREDICTED: filaggrin-2-like isoform X34

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1610758 True 1024 lncRNA 0.35 2 75089127 75090666

Neighbor

gene id symbol gene type direction distance location
LOC110491183 LOC106566345 coding downstream 42154 75029607 ~ 75046973 (-)
irak1 LOC106566344 coding downstream 73748 74986625 ~ 75015379 (-)
LOC110492703 LOC106566343 coding downstream 104292 74922068 ~ 74984835 (-)
LOC118939467 NA coding downstream 183329 74900487 ~ 74905798 (-)
LOC110512152 LOC106566317 coding downstream 331723 74657798 ~ 74757404 (-)
LOC118939468 NA coding upstream 280954 75371620 ~ 75372905 (-)
LOC110492917 LOC106566358 coding upstream 509368 75600034 ~ 75615122 (-)
LOC110492699 tcea2 coding upstream 1013543 76104209 ~ 76119590 (-)
LOC110492709 LOC106566328 coding upstream 1470591 76561257 ~ 76642094 (-)
usp21 LOC106566311 coding upstream 1567237 76657903 ~ 76693758 (-)
G1409794 NA non-coding downstream 26445 75062188 ~ 75062682 (-)
G1409752 NA non-coding downstream 64386 75017613 ~ 75024741 (-)
G1409772 NA non-coding downstream 93866 74994846 ~ 74995261 (-)
G1409768 NA non-coding downstream 115193 74971324 ~ 74973934 (-)
G1409769 NA non-coding downstream 115561 74973095 ~ 74973566 (-)
G1409816 NA non-coding upstream 25067 75115733 ~ 75115957 (-)
G1409823 NA non-coding upstream 45469 75136135 ~ 75136489 (-)
G1409824 NA non-coding upstream 57490 75148156 ~ 75148594 (-)
G1409825 NA non-coding upstream 126154 75216820 ~ 75217092 (-)
G1409843 NA non-coding upstream 173206 75263872 ~ 75264275 (-)
G1409430 LOC106566333 other downstream 241190 74845104 ~ 74847937 (-)
G1409407 NA other downstream 349938 74736433 ~ 74739189 (-)
G1409044 NA other downstream 893176 74195525 ~ 74195951 (-)
rps21 LOC106572905 other downstream 906547 74172873 ~ 74182639 (-)
ppdpfb LOC106566296 other downstream 1311770 73769856 ~ 73777432 (-)
G1409847 NA other upstream 278224 75368890 ~ 75369623 (-)
G1409928 NA other upstream 344388 75435054 ~ 75435540 (-)
G1410190 NA other upstream 665112 75755742 ~ 75756479 (-)
G1410213 NA other upstream 773163 75807474 ~ 75864456 (-)
G1410288 NA other upstream 850041 75940707 ~ 75941802 (-)

Expression


Co-expression Network