Gene
RNA
| Item | Value |
|---|---|
| gene id | G1409824 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 75148156 ~ 75148594 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1610776 | True | 439 | lncRNA | 0.52 | 1 | 75148156 | 75148594 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491183 | LOC106566345 | coding | downstream | 101183 | 75029607 ~ 75046973 (-) |
| irak1 | LOC106566344 | coding | downstream | 132777 | 74986625 ~ 75015379 (-) |
| LOC110492703 | LOC106566343 | coding | downstream | 163321 | 74922068 ~ 74984835 (-) |
| LOC118939467 | NA | coding | downstream | 242358 | 74900487 ~ 74905798 (-) |
| LOC110512152 | LOC106566317 | coding | downstream | 390752 | 74657798 ~ 74757404 (-) |
| LOC118939468 | NA | coding | upstream | 223026 | 75371620 ~ 75372905 (-) |
| LOC110492917 | LOC106566358 | coding | upstream | 451440 | 75600034 ~ 75615122 (-) |
| LOC110492699 | tcea2 | coding | upstream | 955615 | 76104209 ~ 76119590 (-) |
| LOC110492709 | LOC106566328 | coding | upstream | 1412663 | 76561257 ~ 76642094 (-) |
| usp21 | LOC106566311 | coding | upstream | 1509309 | 76657903 ~ 76693758 (-) |
| G1409823 | NA | non-coding | downstream | 11667 | 75136135 ~ 75136489 (-) |
| G1409816 | NA | non-coding | downstream | 32199 | 75115733 ~ 75115957 (-) |
| G1409806 | NA | non-coding | downstream | 57490 | 75089127 ~ 75090666 (-) |
| G1409794 | NA | non-coding | downstream | 85474 | 75062188 ~ 75062682 (-) |
| G1409752 | NA | non-coding | downstream | 123415 | 75017613 ~ 75024741 (-) |
| G1409825 | NA | non-coding | upstream | 68226 | 75216820 ~ 75217092 (-) |
| G1409843 | NA | non-coding | upstream | 115278 | 75263872 ~ 75264275 (-) |
| G1409867 | NA | non-coding | upstream | 153148 | 75301742 ~ 75302130 (-) |
| G1409868 | NA | non-coding | upstream | 153732 | 75302326 ~ 75302653 (-) |
| G1409869 | NA | non-coding | upstream | 154289 | 75302883 ~ 75303365 (-) |
| G1409430 | LOC106566333 | other | downstream | 300219 | 74845104 ~ 74847937 (-) |
| G1409407 | NA | other | downstream | 408967 | 74736433 ~ 74739189 (-) |
| G1409044 | NA | other | downstream | 952205 | 74195525 ~ 74195951 (-) |
| rps21 | LOC106572905 | other | downstream | 965576 | 74172873 ~ 74182639 (-) |
| ppdpfb | LOC106566296 | other | downstream | 1370799 | 73769856 ~ 73777432 (-) |
| G1409847 | NA | other | upstream | 220296 | 75368890 ~ 75369623 (-) |
| G1409928 | NA | other | upstream | 286460 | 75435054 ~ 75435540 (-) |
| G1410190 | NA | other | upstream | 607184 | 75755742 ~ 75756479 (-) |
| G1410213 | NA | other | upstream | 715235 | 75807474 ~ 75864456 (-) |
| G1410288 | NA | other | upstream | 792113 | 75940707 ~ 75941802 (-) |
