G1409868


Basic Information

Item Value
gene id G1409868
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 75302326 ~ 75302653 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1610833
AAAAGGTTAATAGAGGTGTAATAACAGGTTAATAGAGGTGTTATAACAGGTTAATAGAGGTGTTATAACAGGTTAATAGGGGTGTTATAACAGGTTAATAGGGGTGTTATAACAGGTTAATAGAGGTGTTATAACAGGTCATCTCACCTGAGGAGCTCCGTATATGTACAGCACCAGTGGTTCATTCTCTGGGATGACAAACCAGGCTTTCTGCCAGCCTCTGCCTGTTCCCTTCTCCATGTGGTGGAGGAAGCTACACATCACACTGTTCTCTGCTGCCACCGACGCCTGTTTCTGtagaccccc

Function

NR:

description
FYVE, RhoGEF and PH domain-containing protein 1 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1610833 True 306 lncRNA 0.45 2 75302326 75302653

Neighbor

gene id symbol gene type direction distance location
LOC110491183 LOC106566345 coding downstream 255353 75029607 ~ 75046973 (-)
irak1 LOC106566344 coding downstream 286947 74986625 ~ 75015379 (-)
LOC110492703 LOC106566343 coding downstream 317491 74922068 ~ 74984835 (-)
LOC118939467 NA coding downstream 396528 74900487 ~ 74905798 (-)
LOC110512152 LOC106566317 coding downstream 544922 74657798 ~ 74757404 (-)
LOC118939468 NA coding upstream 68967 75371620 ~ 75372905 (-)
LOC110492917 LOC106566358 coding upstream 297381 75600034 ~ 75615122 (-)
LOC110492699 tcea2 coding upstream 801556 76104209 ~ 76119590 (-)
LOC110492709 LOC106566328 coding upstream 1258604 76561257 ~ 76642094 (-)
usp21 LOC106566311 coding upstream 1355250 76657903 ~ 76693758 (-)
G1409867 NA non-coding downstream 196 75301742 ~ 75302130 (-)
G1409843 NA non-coding downstream 38051 75263872 ~ 75264275 (-)
G1409825 NA non-coding downstream 85234 75216820 ~ 75217092 (-)
G1409824 NA non-coding downstream 153732 75148156 ~ 75148594 (-)
G1409823 NA non-coding downstream 165837 75136135 ~ 75136489 (-)
G1409869 NA non-coding upstream 230 75302883 ~ 75303365 (-)
G1409870 NA non-coding upstream 2226 75304879 ~ 75305101 (-)
G1409850 NA non-coding upstream 3795 75306448 ~ 75321235 (-)
G1409871 NA non-coding upstream 13600 75316253 ~ 75319186 (-)
G1409877 NA non-coding upstream 25835 75328488 ~ 75329314 (-)
G1409430 LOC106566333 other downstream 454389 74845104 ~ 74847937 (-)
G1409407 NA other downstream 563137 74736433 ~ 74739189 (-)
G1409044 NA other downstream 1106375 74195525 ~ 74195951 (-)
rps21 LOC106572905 other downstream 1119746 74172873 ~ 74182639 (-)
ppdpfb LOC106566296 other downstream 1524969 73769856 ~ 73777432 (-)
G1409847 NA other upstream 66237 75368890 ~ 75369623 (-)
G1409928 NA other upstream 132401 75435054 ~ 75435540 (-)
G1410190 NA other upstream 453125 75755742 ~ 75756479 (-)
G1410213 NA other upstream 561176 75807474 ~ 75864456 (-)
G1410288 NA other upstream 638054 75940707 ~ 75941802 (-)

Expression


Co-expression Network