Gene
RNA
| Item | Value |
|---|---|
| gene id | G1409869 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 75302883 ~ 75303365 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1610834 | True | 264 | lncRNA | 0.35 | 3 | 75302883 | 75303365 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491183 | LOC106566345 | coding | downstream | 255910 | 75029607 ~ 75046973 (-) |
| irak1 | LOC106566344 | coding | downstream | 287504 | 74986625 ~ 75015379 (-) |
| LOC110492703 | LOC106566343 | coding | downstream | 318048 | 74922068 ~ 74984835 (-) |
| LOC118939467 | NA | coding | downstream | 397085 | 74900487 ~ 74905798 (-) |
| LOC110512152 | LOC106566317 | coding | downstream | 545479 | 74657798 ~ 74757404 (-) |
| LOC118939468 | NA | coding | upstream | 68255 | 75371620 ~ 75372905 (-) |
| LOC110492917 | LOC106566358 | coding | upstream | 296669 | 75600034 ~ 75615122 (-) |
| LOC110492699 | tcea2 | coding | upstream | 800844 | 76104209 ~ 76119590 (-) |
| LOC110492709 | LOC106566328 | coding | upstream | 1257892 | 76561257 ~ 76642094 (-) |
| usp21 | LOC106566311 | coding | upstream | 1354538 | 76657903 ~ 76693758 (-) |
| G1409868 | NA | non-coding | downstream | 230 | 75302326 ~ 75302653 (-) |
| G1409867 | NA | non-coding | downstream | 753 | 75301742 ~ 75302130 (-) |
| G1409843 | NA | non-coding | downstream | 38608 | 75263872 ~ 75264275 (-) |
| G1409825 | NA | non-coding | downstream | 85791 | 75216820 ~ 75217092 (-) |
| G1409824 | NA | non-coding | downstream | 154289 | 75148156 ~ 75148594 (-) |
| G1409870 | NA | non-coding | upstream | 1514 | 75304879 ~ 75305101 (-) |
| G1409850 | NA | non-coding | upstream | 3083 | 75306448 ~ 75321235 (-) |
| G1409871 | NA | non-coding | upstream | 12888 | 75316253 ~ 75319186 (-) |
| G1409877 | NA | non-coding | upstream | 25123 | 75328488 ~ 75329314 (-) |
| G1409883 | tfe3 | non-coding | upstream | 38200 | 75341565 ~ 75343084 (-) |
| G1409430 | LOC106566333 | other | downstream | 454946 | 74845104 ~ 74847937 (-) |
| G1409407 | NA | other | downstream | 563694 | 74736433 ~ 74739189 (-) |
| G1409044 | NA | other | downstream | 1106932 | 74195525 ~ 74195951 (-) |
| rps21 | LOC106572905 | other | downstream | 1120303 | 74172873 ~ 74182639 (-) |
| ppdpfb | LOC106566296 | other | downstream | 1525526 | 73769856 ~ 73777432 (-) |
| G1409847 | NA | other | upstream | 65525 | 75368890 ~ 75369623 (-) |
| G1409928 | NA | other | upstream | 131689 | 75435054 ~ 75435540 (-) |
| G1410190 | NA | other | upstream | 452413 | 75755742 ~ 75756479 (-) |
| G1410213 | NA | other | upstream | 560464 | 75807474 ~ 75864456 (-) |
| G1410288 | NA | other | upstream | 637342 | 75940707 ~ 75941802 (-) |
