G1409885


Basic Information

Item Value
gene id G1409885
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 75348555 ~ 75354573 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1610867
gttactgtcagtattacctgtataggtagcagtaggttactgtcagtattacctgtataggtagcagtaggttactgtcagtattacctgtataggtatgttactgtcagtattacctgtataggtatgttactgtcagtattacctgtataggtagcagtaggttactgtcagtattacctgtataggtagcagtaggttactgtcagtattacctgtataggtagcagtaggttagtgtcagtattacctgtataggtagcagtaggttactgtcagtattacctgtataggtagcagtatgttactgtcagtattacctgtataggtagc
>TU1610866
cagtaggttactgtcagtattacctgtataggtagcagtaggttactgtcagtattacctgtatagatatgttactgtcagtattacctgtatacgtagcagtaggttactgtcagtattacctttataggtatgttactgtcagtattacctgtataggtagcagtaggttactgtcagtattacctgtataggtagcagtaggttactgtcagtattacctgtataagtatgttactgtcagtattacctgtataggtagcagtatgttactgtcagtattacctgtataggtagcagtatgttactgtcagtattacctgtataggtagcagtaggttactgtcagtattacctgtataggtagcagtaggttactgtcagtattacctgtatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1610867 False 333 lncRNA 0.39 3 75348555 75353028
TU1610866 True 398 lncRNA 0.37 2 75352742 75354573

Neighbor

gene id symbol gene type direction distance location
LOC110491183 LOC106566345 coding downstream 301582 75029607 ~ 75046973 (-)
irak1 LOC106566344 coding downstream 333176 74986625 ~ 75015379 (-)
LOC110492703 LOC106566343 coding downstream 363720 74922068 ~ 74984835 (-)
LOC118939467 NA coding downstream 442757 74900487 ~ 74905798 (-)
LOC110512152 LOC106566317 coding downstream 591151 74657798 ~ 74757404 (-)
LOC118939468 NA coding upstream 17047 75371620 ~ 75372905 (-)
LOC110492917 LOC106566358 coding upstream 245461 75600034 ~ 75615122 (-)
LOC110492699 tcea2 coding upstream 749636 76104209 ~ 76119590 (-)
LOC110492709 LOC106566328 coding upstream 1206684 76561257 ~ 76642094 (-)
usp21 LOC106566311 coding upstream 1303330 76657903 ~ 76693758 (-)
G1409883 tfe3 non-coding downstream 5471 75341565 ~ 75343084 (-)
G1409877 NA non-coding downstream 19241 75328488 ~ 75329314 (-)
G1409850 NA non-coding downstream 27320 75306448 ~ 75321235 (-)
G1409871 NA non-coding downstream 29369 75316253 ~ 75319186 (-)
G1409870 NA non-coding downstream 43454 75304879 ~ 75305101 (-)
G1409889 NA non-coding upstream 1224 75355797 ~ 75363553 (-)
G1409849 NA non-coding upstream 18897 75373470 ~ 75374846 (-)
G1409896 NA non-coding upstream 27499 75382072 ~ 75382800 (-)
G1409897 NA non-coding upstream 28412 75382985 ~ 75383410 (-)
G1409905 NA non-coding upstream 51108 75405681 ~ 75405954 (-)
G1409430 LOC106566333 other downstream 500618 74845104 ~ 74847937 (-)
G1409407 NA other downstream 609366 74736433 ~ 74739189 (-)
G1409044 NA other downstream 1152604 74195525 ~ 74195951 (-)
rps21 LOC106572905 other downstream 1165975 74172873 ~ 74182639 (-)
ppdpfb LOC106566296 other downstream 1571198 73769856 ~ 73777432 (-)
G1409847 NA other upstream 14317 75368890 ~ 75369623 (-)
G1409928 NA other upstream 80481 75435054 ~ 75435540 (-)
G1410190 NA other upstream 401205 75755742 ~ 75756479 (-)
G1410213 NA other upstream 509256 75807474 ~ 75864456 (-)
G1410288 NA other upstream 586134 75940707 ~ 75941802 (-)

Expression


Co-expression Network