Gene
RNA
| Item | Value |
|---|---|
| gene id | G1409886 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 75351130 ~ 75358685 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1610871 | True | 406 | lncRNA | 0.39 | 3 | 75351130 | 75358685 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491183 | LOC106566345 | coding | downstream | 304157 | 75029607 ~ 75046973 (-) |
| irak1 | LOC106566344 | coding | downstream | 335751 | 74986625 ~ 75015379 (-) |
| LOC110492703 | LOC106566343 | coding | downstream | 366295 | 74922068 ~ 74984835 (-) |
| LOC118939467 | NA | coding | downstream | 445332 | 74900487 ~ 74905798 (-) |
| LOC110512152 | LOC106566317 | coding | downstream | 593726 | 74657798 ~ 74757404 (-) |
| LOC118939468 | NA | coding | upstream | 12935 | 75371620 ~ 75372905 (-) |
| LOC110492917 | LOC106566358 | coding | upstream | 241349 | 75600034 ~ 75615122 (-) |
| LOC110492699 | tcea2 | coding | upstream | 745524 | 76104209 ~ 76119590 (-) |
| LOC110492709 | LOC106566328 | coding | upstream | 1202572 | 76561257 ~ 76642094 (-) |
| usp21 | LOC106566311 | coding | upstream | 1299218 | 76657903 ~ 76693758 (-) |
| G1409883 | tfe3 | non-coding | downstream | 8046 | 75341565 ~ 75343084 (-) |
| G1409877 | NA | non-coding | downstream | 21816 | 75328488 ~ 75329314 (-) |
| G1409850 | NA | non-coding | downstream | 29895 | 75306448 ~ 75321235 (-) |
| G1409871 | NA | non-coding | downstream | 31944 | 75316253 ~ 75319186 (-) |
| G1409870 | NA | non-coding | downstream | 46029 | 75304879 ~ 75305101 (-) |
| G1409849 | NA | non-coding | upstream | 14785 | 75373470 ~ 75374846 (-) |
| G1409896 | NA | non-coding | upstream | 23387 | 75382072 ~ 75382800 (-) |
| G1409897 | NA | non-coding | upstream | 24300 | 75382985 ~ 75383410 (-) |
| G1409905 | NA | non-coding | upstream | 46996 | 75405681 ~ 75405954 (-) |
| G1409913 | NA | non-coding | upstream | 58102 | 75416787 ~ 75417057 (-) |
| G1409430 | LOC106566333 | other | downstream | 503193 | 74845104 ~ 74847937 (-) |
| G1409407 | NA | other | downstream | 611941 | 74736433 ~ 74739189 (-) |
| G1409044 | NA | other | downstream | 1155179 | 74195525 ~ 74195951 (-) |
| rps21 | LOC106572905 | other | downstream | 1168550 | 74172873 ~ 74182639 (-) |
| ppdpfb | LOC106566296 | other | downstream | 1573773 | 73769856 ~ 73777432 (-) |
| G1409847 | NA | other | upstream | 10205 | 75368890 ~ 75369623 (-) |
| G1409928 | NA | other | upstream | 76369 | 75435054 ~ 75435540 (-) |
| G1410190 | NA | other | upstream | 397093 | 75755742 ~ 75756479 (-) |
| G1410213 | NA | other | upstream | 505144 | 75807474 ~ 75864456 (-) |
| G1410288 | NA | other | upstream | 582022 | 75940707 ~ 75941802 (-) |
