G1409889


Basic Information

Item Value
gene id G1409889
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 75355797 ~ 75363553 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1610877
gttactgtcagtgttacctgtataggtagcagtaggttactgtcagtgttacctgtataggtagcagtaggttactgtcagtattacctgtataggtagcagtaggttactgtcagtattacctgtatagatatgttactgtcagtattacctgtatacgtagcagtaggatactgtcagtgttacctgtataggtagcagtaggttactgtcagtattacctgtatacgtagcagtaggatactgtcagtattacctgtataggtagcagtaggttactgtcagtattacctgtatacgtagcagtaggatactgtcagtgttacctgtataggtagcagtaggttactgtcagtattacctgtataggtagcagtaggttactgtcagtattacctgtataggtagcagtaggttactgtcagtattacctgtataggtagcagtatgttactgtcagtgttacctgtataggtagcagtatgttactgtcagtattacctgtataggtagcagtaggttactgtcagtattacctgtatacgtagcagtaggttactgtcagtattacctgtatacgtagcagtaggttactgtcagtattacctgtataggtagcagtaggttactgtcagtattacctgtatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1610877 True 649 lncRNA 0.40 3 75355797 75363553

Neighbor

gene id symbol gene type direction distance location
LOC110491183 LOC106566345 coding downstream 308824 75029607 ~ 75046973 (-)
irak1 LOC106566344 coding downstream 340418 74986625 ~ 75015379 (-)
LOC110492703 LOC106566343 coding downstream 370962 74922068 ~ 74984835 (-)
LOC118939467 NA coding downstream 449999 74900487 ~ 74905798 (-)
LOC110512152 LOC106566317 coding downstream 598393 74657798 ~ 74757404 (-)
LOC118939468 NA coding upstream 8067 75371620 ~ 75372905 (-)
LOC110492917 LOC106566358 coding upstream 236481 75600034 ~ 75615122 (-)
LOC110492699 tcea2 coding upstream 740656 76104209 ~ 76119590 (-)
LOC110492709 LOC106566328 coding upstream 1197704 76561257 ~ 76642094 (-)
usp21 LOC106566311 coding upstream 1294350 76657903 ~ 76693758 (-)
G1409885 NA non-coding downstream 1224 75348555 ~ 75354573 (-)
G1409883 tfe3 non-coding downstream 12713 75341565 ~ 75343084 (-)
G1409877 NA non-coding downstream 26483 75328488 ~ 75329314 (-)
G1409850 NA non-coding downstream 34562 75306448 ~ 75321235 (-)
G1409871 NA non-coding downstream 36611 75316253 ~ 75319186 (-)
G1409849 NA non-coding upstream 9917 75373470 ~ 75374846 (-)
G1409896 NA non-coding upstream 18519 75382072 ~ 75382800 (-)
G1409897 NA non-coding upstream 19432 75382985 ~ 75383410 (-)
G1409905 NA non-coding upstream 42128 75405681 ~ 75405954 (-)
G1409913 NA non-coding upstream 53234 75416787 ~ 75417057 (-)
G1409430 LOC106566333 other downstream 507860 74845104 ~ 74847937 (-)
G1409407 NA other downstream 616608 74736433 ~ 74739189 (-)
G1409044 NA other downstream 1159846 74195525 ~ 74195951 (-)
rps21 LOC106572905 other downstream 1173217 74172873 ~ 74182639 (-)
ppdpfb LOC106566296 other downstream 1578440 73769856 ~ 73777432 (-)
G1409847 NA other upstream 5337 75368890 ~ 75369623 (-)
G1409928 NA other upstream 71501 75435054 ~ 75435540 (-)
G1410190 NA other upstream 392225 75755742 ~ 75756479 (-)
G1410213 NA other upstream 500276 75807474 ~ 75864456 (-)
G1410288 NA other upstream 577154 75940707 ~ 75941802 (-)

Expression


Co-expression Network