G1410213


Basic Information

Item Value
gene id G1410213
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 75807474 ~ 75864456 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1611258
gtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtatgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtgtgtctgtctgtctgtctgtctgtctgtgtgtctgtctgtctgtgtgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtgtgtctgtctgtctgtctgtctgtgtgtctgtctgtctgtctgtgtctgtctgtgtgtgtgt
>TU1611257
gtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtatgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtgtgtctgtctgtctgtctgtctgtctgtgtgtctgtctgtgtgtgtgtctgtctgtgtgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtgtgtctgtctgtctgtctgtctgtgtgtctgtctgtgtatgtctgtctgtctgtctgtctgtctgtctgtctgtctgtgtgtctgtctgtgtgtctgtctgtgtgtctgtctgtgtgtctgtctgtgtgtctgtctgtgtgtctgtctgtgtatgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtcagacacagacagacagacagacagacagacagacagacacacagacagacagacagacagacagacagacacagacagacacacagacagacagacagaca
>TU1611260
gtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtatgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtgtgtctgtctgtctgtctgtctgtctgtgtgtctgtctgtctgtgtgtctgtctgtctgtctgtctgtgtgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtcagacacagacagacagacagacagacagacagacagacacacagacagacagacagacagacagacagacacagacagacacacagacagacagacagaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1611258 False 294 lncRNA 0.50 4 75807474 75864456
TU1611257 False 550 TUCP 0.49 2 75863829 75864456
TU1611260 True 354 lncRNA 0.50 3 75863829 75864456

Neighbor

gene id symbol gene type direction distance location
LOC110492917 LOC106566358 coding downstream 192352 75600034 ~ 75615122 (-)
LOC118939468 NA coding downstream 434569 75371620 ~ 75372905 (-)
LOC110491183 LOC106566345 coding downstream 760501 75029607 ~ 75046973 (-)
irak1 LOC106566344 coding downstream 792095 74986625 ~ 75015379 (-)
LOC110492703 LOC106566343 coding downstream 822639 74922068 ~ 74984835 (-)
LOC110492699 tcea2 coding upstream 239753 76104209 ~ 76119590 (-)
LOC110492709 LOC106566328 coding upstream 696801 76561257 ~ 76642094 (-)
usp21 LOC106566311 coding upstream 793447 76657903 ~ 76693758 (-)
LOC110514470 uba1 coding upstream 841333 76705789 ~ 76774764 (-)
LOC118939598 LOC106572974 coding upstream 942695 76807151 ~ 76997020 (-)
G1410181 NA non-coding downstream 15082 75741426 ~ 75792392 (-)
G1410201 NA non-coding downstream 35705 75771442 ~ 75771769 (-)
G1410196 NA non-coding downstream 41177 75766020 ~ 75766297 (-)
G1410190 NA non-coding downstream 50995 75755742 ~ 75756479 (-)
G1410178 NA non-coding downstream 70367 75736612 ~ 75737107 (-)
G1410263 NA non-coding upstream 34210 75898666 ~ 75898886 (-)
G1410264 NA non-coding upstream 35532 75899988 ~ 75900260 (-)
G1410266 NA non-coding upstream 41977 75906433 ~ 75906691 (-)
G1410267 NA non-coding upstream 42400 75906856 ~ 75907096 (-)
G1410268 NA non-coding upstream 42697 75907153 ~ 75908493 (-)
G1409928 NA other downstream 371934 75435054 ~ 75435540 (-)
G1409847 NA other downstream 437851 75368890 ~ 75369623 (-)
G1409430 LOC106566333 other downstream 959537 74845104 ~ 74847937 (-)
G1409407 NA other downstream 1068285 74736433 ~ 74739189 (-)
G1410288 NA other upstream 76251 75940707 ~ 75941802 (-)
G1410456 NA other upstream 196613 76061069 ~ 76061732 (-)
G1410487 LOC106566354 other upstream 300187 76164643 ~ 76165488 (-)
G1410557 NA other upstream 388765 76253221 ~ 76311947 (-)
G1410245 NA non-coding downstream 2868 75860519 ~ 75860961 (-)
G1410241 NA non-coding downstream 11820 75851251 ~ 75852009 (-)
G1410231 NA non-coding downstream 30633 75832729 ~ 75833196 (-)

Expression


Co-expression Network