G1410468


Basic Information

Item Value
gene id G1410468
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 76099667 ~ 76100856 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1611589
CTGGAATCCAGTAGGTTCTGGAATCCAGTAGGTTCTGGTCGTCTTTAATTATTGATTCAAATGTTTGTATTTGATGTCAACTCAACAAAATAAGAAACGTCCTCTCagtgtcaactgcgtttattttcagcaaacttatgtgtaaatatttgtatgaccataaccagattcaacaactgagacacaaaGTGAAGAAGTTtcacagacatgtaactaacagaaatggaattatgtttccctgaacaaaggcgggggtcaaaatccaaagtaacagtcagtatctggtgtggccaccagctgcattaagtactgcagtgcgtgcagtacttaatgcatggactgcaccagatttgccagttcttgctgtgagatgttaccccactcttccaccaaggcacctgcaagttcccagacatttctgggggaatggccctagccctctccctccaatccaacaggtcccagacttgctcaatgggattccgatccgggctcttcgctggccatagcAGGATACTGACAttccttgcaggaaatcacacacagaacaagcagtatggctggtggcattgtcatgctggagggttatTTAAGAatgagtctgcaggaagggtaccacatgagggaggaggatgtcttccctgtaacgcacagcgttgagattgtctgcaatgacaacaagctaagtccgatgatgctgtgacacaccgccccagaccatgacggaccctccaaatcgatcccgctccagagtacaggcctcggtgtaactctcatcccttcgacgataaacgcaaatccgaccatcacccctgttgagacaaaaccgcgactcgtcagagaagagcactttttgccagtcctgtctgatccagcgacggtgggtttgcaACCATAGGCCACGTTGTTGCCAGtggtgtctggtgaggacctaccttacaacaggcctacaagccctcaatccagcctctctcagcttattgcggacagtctgagtacTGTTGGAGGGATtatgtgttcctggtgtaacttgggcagttgttatgcatctcacagtacggacattgcaatttattgccctggccacatccgctgtcttcatgcctccttgcagcatgcccaatgcacgcagatgagcagggaccccaggcatctttcttttggtgtttttcagagtcagtagaaagccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1611589 True 1190 lncRNA 0.49 1 76099667 76100856

Neighbor

gene id symbol gene type direction distance location
LOC110492917 LOC106566358 coding downstream 484545 75600034 ~ 75615122 (-)
LOC118939468 NA coding downstream 726762 75371620 ~ 75372905 (-)
LOC110491183 LOC106566345 coding downstream 1052694 75029607 ~ 75046973 (-)
irak1 LOC106566344 coding downstream 1084288 74986625 ~ 75015379 (-)
LOC110492703 LOC106566343 coding downstream 1114832 74922068 ~ 74984835 (-)
LOC110492699 tcea2 coding upstream 3353 76104209 ~ 76119590 (-)
LOC110492709 LOC106566328 coding upstream 460401 76561257 ~ 76642094 (-)
usp21 LOC106566311 coding upstream 557047 76657903 ~ 76693758 (-)
LOC110514470 uba1 coding upstream 604933 76705789 ~ 76774764 (-)
LOC118939598 LOC106572974 coding upstream 706295 76807151 ~ 76997020 (-)
G1410465 NA non-coding downstream 5615 76091431 ~ 76094052 (-)
G1410428 NA non-coding downstream 79200 76020052 ~ 76020467 (-)
G1410422 NA non-coding downstream 91351 75997919 ~ 76008316 (-)
G1410402 NA non-coding downstream 129524 75969196 ~ 75970143 (-)
G1410298 NA non-coding downstream 138140 75961318 ~ 75961527 (-)
G1410470 NA non-coding upstream 171 76101027 ~ 76102220 (-)
G1410472 NA non-coding upstream 7187 76108043 ~ 76109361 (-)
G1410478 NA non-coding upstream 26925 76127781 ~ 76128095 (-)
G1410495 NA non-coding upstream 93888 76194744 ~ 76195033 (-)
G1410518 NA non-coding upstream 107372 76208228 ~ 76252231 (-)
G1410456 NA other downstream 37935 76061069 ~ 76061732 (-)
G1410288 NA other downstream 157865 75940707 ~ 75941802 (-)
G1410213 NA other downstream 235211 75807474 ~ 75864456 (-)
G1410190 NA other downstream 343188 75755742 ~ 75756479 (-)
G1409928 NA other downstream 664127 75435054 ~ 75435540 (-)
G1410487 LOC106566354 other upstream 63787 76164643 ~ 76165488 (-)
G1410557 NA other upstream 152365 76253221 ~ 76311947 (-)
G1410696 NA other upstream 456184 76557040 ~ 76558174 (-)
G1410701 NA other upstream 541924 76642780 ~ 76645664 (-)

Expression


Co-expression Network