G1410470


Basic Information

Item Value
gene id G1410470
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 76101027 ~ 76102220 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1611592
ataaagacatttcaaatgtcatattatgtatatttacagtgttgtaatgatatgcaAATGATATGCaaaagttaaagtacaaaaggaaaaataaatcaacataaacatgggttgcatttacaatggtgtttgttcttcactggttgccctacgttgtacacggatgatatttttgcagaattctgcgtgcagagtctcaatttggtgtttgtcccattttgtgaagtcttggttggtgagcggaccccagacctcacaaccataaagggcaatgggttctataactgattcaagtatttttagcctaatactaattggtatgtcaaattttatgttccttttgatggcattgaatgcccttcttgcctcgTCTCTCaaatcgttcacagctttgtggaagttacctgtggcgctgatgtttaggccaaggtactgtatgtatagtttttggtgtgctctagggcaaccgtatctagatggaatttgttttCGTGGtactggtgactggaccttttttagaacaccattatttttgtcttggTGAGATTTAccgtcagggcccaggtctgtcagggcccaggtctgacagaatctgtgcagaagatcttggtgctgctgtaggccctccttggttggtgacagaagcaccagatcatcagtagatatttgacttcagattctagtagggtgaggctgggtgctgcagactgttctagtgccctcgccaatacCTTGAtatgtatgttgaagagggtggggcttaagctgcatccctgtctcacccccggCCCCGTGGGAAgaaattcgtttttttttttgttgccaattttaaccacacacttgttgtttgtttcAGTTGTGTAGCAGGTCCTGAAAGCTTTTtttgaaataaacaaaacatgaGAAGGCTTTGCTTTTGTTTTGtctggtttgtttgtcaattagggtgtgcagggtgaatacgtggtctgtcgtatggtaatttggtaaaaagccaatttgacatttgctcagtacattgttttcgctgaggaaatgtatgagtctgctgttaatggtAATGCAgaagattttcccaaggttgctgttgacgtaGTCATTGacgtagttattggggtcaaatttgtctccacttttgtggattggggtgatcagtcctttgtTCCAAATACTGGGGAAGACGCCAGAGCTGAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1611592 True 1194 lncRNA 0.42 1 76101027 76102220

Neighbor

gene id symbol gene type direction distance location
LOC110492917 LOC106566358 coding downstream 485905 75600034 ~ 75615122 (-)
LOC118939468 NA coding downstream 728122 75371620 ~ 75372905 (-)
LOC110491183 LOC106566345 coding downstream 1054054 75029607 ~ 75046973 (-)
irak1 LOC106566344 coding downstream 1085648 74986625 ~ 75015379 (-)
LOC110492703 LOC106566343 coding downstream 1116192 74922068 ~ 74984835 (-)
LOC110492699 tcea2 coding upstream 1989 76104209 ~ 76119590 (-)
LOC110492709 LOC106566328 coding upstream 459037 76561257 ~ 76642094 (-)
usp21 LOC106566311 coding upstream 555683 76657903 ~ 76693758 (-)
LOC110514470 uba1 coding upstream 603569 76705789 ~ 76774764 (-)
LOC118939598 LOC106572974 coding upstream 704931 76807151 ~ 76997020 (-)
G1410468 NA non-coding downstream 171 76099667 ~ 76100856 (-)
G1410465 NA non-coding downstream 6975 76091431 ~ 76094052 (-)
G1410428 NA non-coding downstream 80560 76020052 ~ 76020467 (-)
G1410422 NA non-coding downstream 92711 75997919 ~ 76008316 (-)
G1410402 NA non-coding downstream 130884 75969196 ~ 75970143 (-)
G1410472 NA non-coding upstream 5823 76108043 ~ 76109361 (-)
G1410478 NA non-coding upstream 25561 76127781 ~ 76128095 (-)
G1410495 NA non-coding upstream 92524 76194744 ~ 76195033 (-)
G1410518 NA non-coding upstream 106008 76208228 ~ 76252231 (-)
G1410520 NA non-coding upstream 108343 76210563 ~ 76214924 (-)
G1410456 NA other downstream 39295 76061069 ~ 76061732 (-)
G1410288 NA other downstream 159225 75940707 ~ 75941802 (-)
G1410213 NA other downstream 236571 75807474 ~ 75864456 (-)
G1410190 NA other downstream 344548 75755742 ~ 75756479 (-)
G1409928 NA other downstream 665487 75435054 ~ 75435540 (-)
G1410487 LOC106566354 other upstream 62423 76164643 ~ 76165488 (-)
G1410557 NA other upstream 151001 76253221 ~ 76311947 (-)
G1410696 NA other upstream 454820 76557040 ~ 76558174 (-)
G1410701 NA other upstream 540560 76642780 ~ 76645664 (-)

Expression


Co-expression Network