G1410487 (LOC106566354)


Basic Information

Item Value
gene id G1410487
gene name LOC106566354
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 76164643 ~ 76165488 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1611610
TGAGGACAGCATTGTGGAGGTCTGGGTTCTGAACAGCCAGTCGTTTCCTCTCGTCTTTAGCCCACACCATGAAGGCGTTCATGGGCCGACGGATCCTCGACTCACCCCCTGGCTTCCCTTCTCCGCTACCCAAGGAAGGTGCTCCTGGGTGGGTCGAGTCAGGACTACCTGCCCCTGTCCATGGTCCACTCCCTGGGGCTCCTGTACCGGCCTCTTTACGGGACCCAGCGGGGCCACagtctccagatccttcagagaGGGGGGTCTTGTCGAAGGGTCTTAGCCCACGATCAGGACCCGGGCTGGGGGAAGACACCCATGGACGCTGACCGGTTCCATCCTGGCCTGGCAAAGAACTGGCCTCACAACAGAAACTAGACTCAGATATATCCATACCAGCTAGACAAAATCCTAGTTAGTAGTTTAGTAGTCCAATTGATGTTGTTGTTCGGTAACCTTTTAAACAGCAGCAAAAACAAGGAGTTTATAATCTCAAAGGTCCcatgactctctctgtctctctctctgtctctgtctctcactctcgctctctctctctctctctctctctctctctctctctctctctcttctcttctcttctcttctcttctcttctcttctcttctcttctcttctcttctcctctctctctctctctctcctctcttctcttctcttttctctctctctgttttccagAACTCGTTGTTGGTGTGTCCAGGCTGTTTCTCCTCTGTTATTCCAGAGCTTCAG

Function

NR:

description
transcription factor Sox-18-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1611610 True 756 TUCP 0.52 2 76164643 76165488

Neighbor

gene id symbol gene type direction distance location
LOC110492699 tcea2 coding downstream 45053 76104209 ~ 76119590 (-)
LOC110492917 LOC106566358 coding downstream 549521 75600034 ~ 75615122 (-)
LOC118939468 NA coding downstream 791738 75371620 ~ 75372905 (-)
LOC110491183 LOC106566345 coding downstream 1117670 75029607 ~ 75046973 (-)
irak1 LOC106566344 coding downstream 1149264 74986625 ~ 75015379 (-)
LOC110492709 LOC106566328 coding upstream 395769 76561257 ~ 76642094 (-)
usp21 LOC106566311 coding upstream 492415 76657903 ~ 76693758 (-)
LOC110514470 uba1 coding upstream 540301 76705789 ~ 76774764 (-)
LOC118939598 LOC106572974 coding upstream 641663 76807151 ~ 76997020 (-)
LOC110492706 LOC106566322 coding upstream 936592 77102080 ~ 77104717 (-)
G1410478 NA non-coding downstream 36548 76127781 ~ 76128095 (-)
G1410472 NA non-coding downstream 55282 76108043 ~ 76109361 (-)
G1410470 NA non-coding downstream 62423 76101027 ~ 76102220 (-)
G1410468 NA non-coding downstream 63787 76099667 ~ 76100856 (-)
G1410465 NA non-coding downstream 70591 76091431 ~ 76094052 (-)
G1410495 NA non-coding upstream 29256 76194744 ~ 76195033 (-)
G1410518 NA non-coding upstream 42740 76208228 ~ 76252231 (-)
G1410520 NA non-coding upstream 45075 76210563 ~ 76214924 (-)
G1410557 NA non-coding upstream 87733 76253221 ~ 76311947 (-)
G1410558 NA non-coding upstream 91488 76256976 ~ 76260661 (-)
G1410456 NA other downstream 102911 76061069 ~ 76061732 (-)
G1410288 NA other downstream 222841 75940707 ~ 75941802 (-)
G1410213 NA other downstream 300187 75807474 ~ 75864456 (-)
G1410190 NA other downstream 408164 75755742 ~ 75756479 (-)
G1410696 NA other upstream 391552 76557040 ~ 76558174 (-)
G1410701 NA other upstream 477292 76642780 ~ 76645664 (-)
G1410773 NA other upstream 626932 76792420 ~ 76795053 (-)
G1410776 LOC106591762 other upstream 630095 76795583 ~ 76797111 (-)

Expression


Co-expression Network