Gene
RNA
| Item | Value |
|---|---|
| gene id | G1410518 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 76208228 ~ 76252231 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: platelet glycoprotein Ib alpha chain-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1611642 | False | 373 | lncRNA | 0.59 | 4 | 76208228 | 76252231 |
| TU1611641 | True | 523 | lncRNA | 0.58 | 2 | 76216525 | 76218100 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492699 | tcea2 | coding | downstream | 88638 | 76104209 ~ 76119590 (-) |
| LOC110492917 | LOC106566358 | coding | downstream | 593106 | 75600034 ~ 75615122 (-) |
| LOC118939468 | NA | coding | downstream | 835323 | 75371620 ~ 75372905 (-) |
| LOC110491183 | LOC106566345 | coding | downstream | 1161255 | 75029607 ~ 75046973 (-) |
| irak1 | LOC106566344 | coding | downstream | 1192849 | 74986625 ~ 75015379 (-) |
| LOC110492709 | LOC106566328 | coding | upstream | 309026 | 76561257 ~ 76642094 (-) |
| usp21 | LOC106566311 | coding | upstream | 405672 | 76657903 ~ 76693758 (-) |
| LOC110514470 | uba1 | coding | upstream | 453558 | 76705789 ~ 76774764 (-) |
| LOC118939598 | LOC106572974 | coding | upstream | 554920 | 76807151 ~ 76997020 (-) |
| LOC110492706 | LOC106566322 | coding | upstream | 849849 | 77102080 ~ 77104717 (-) |
| G1410495 | NA | non-coding | downstream | 13195 | 76194744 ~ 76195033 (-) |
| G1410478 | NA | non-coding | downstream | 80133 | 76127781 ~ 76128095 (-) |
| G1410472 | NA | non-coding | downstream | 98867 | 76108043 ~ 76109361 (-) |
| G1410470 | NA | non-coding | downstream | 106008 | 76101027 ~ 76102220 (-) |
| G1410468 | NA | non-coding | downstream | 107372 | 76099667 ~ 76100856 (-) |
| G1410557 | NA | non-coding | upstream | 990 | 76253221 ~ 76311947 (-) |
| G1410558 | NA | non-coding | upstream | 4745 | 76256976 ~ 76260661 (-) |
| G1410562 | NA | non-coding | upstream | 36134 | 76288365 ~ 76308166 (-) |
| G1410567 | NA | non-coding | upstream | 70045 | 76322276 ~ 76324000 (-) |
| G1410571 | LOC106572959 | non-coding | upstream | 85299 | 76337530 ~ 76337854 (-) |
| G1410487 | LOC106566354 | other | downstream | 42740 | 76164643 ~ 76165488 (-) |
| G1410456 | NA | other | downstream | 146496 | 76061069 ~ 76061732 (-) |
| G1410288 | NA | other | downstream | 266426 | 75940707 ~ 75941802 (-) |
| G1410213 | NA | other | downstream | 343772 | 75807474 ~ 75864456 (-) |
| G1410696 | NA | other | upstream | 304809 | 76557040 ~ 76558174 (-) |
| G1410701 | NA | other | upstream | 390549 | 76642780 ~ 76645664 (-) |
| G1410773 | NA | other | upstream | 540189 | 76792420 ~ 76795053 (-) |
| G1410776 | LOC106591762 | other | upstream | 543352 | 76795583 ~ 76797111 (-) |
