Gene
RNA
| Item | Value |
|---|---|
| gene id | G1410562 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 76288365 ~ 76308166 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: coiled-coil domain-containing protein 108 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1611725 | True | 309 | lncRNA | 0.38 | 2 | 76288365 | 76308166 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492699 | tcea2 | coding | downstream | 168775 | 76104209 ~ 76119590 (-) |
| LOC110492917 | LOC106566358 | coding | downstream | 673243 | 75600034 ~ 75615122 (-) |
| LOC118939468 | NA | coding | downstream | 915460 | 75371620 ~ 75372905 (-) |
| LOC110491183 | LOC106566345 | coding | downstream | 1241392 | 75029607 ~ 75046973 (-) |
| irak1 | LOC106566344 | coding | downstream | 1272986 | 74986625 ~ 75015379 (-) |
| LOC110492709 | LOC106566328 | coding | upstream | 253091 | 76561257 ~ 76642094 (-) |
| usp21 | LOC106566311 | coding | upstream | 349737 | 76657903 ~ 76693758 (-) |
| LOC110514470 | uba1 | coding | upstream | 397623 | 76705789 ~ 76774764 (-) |
| LOC118939598 | LOC106572974 | coding | upstream | 498985 | 76807151 ~ 76997020 (-) |
| LOC110492706 | LOC106566322 | coding | upstream | 793914 | 77102080 ~ 77104717 (-) |
| G1410558 | NA | non-coding | downstream | 27704 | 76256976 ~ 76260661 (-) |
| G1410518 | NA | non-coding | downstream | 36134 | 76208228 ~ 76252231 (-) |
| G1410520 | NA | non-coding | downstream | 73441 | 76210563 ~ 76214924 (-) |
| G1410495 | NA | non-coding | downstream | 93332 | 76194744 ~ 76195033 (-) |
| G1410478 | NA | non-coding | downstream | 160270 | 76127781 ~ 76128095 (-) |
| G1410567 | NA | non-coding | upstream | 14110 | 76322276 ~ 76324000 (-) |
| G1410571 | LOC106572959 | non-coding | upstream | 29364 | 76337530 ~ 76337854 (-) |
| G1410573 | LOC106594084 | non-coding | upstream | 57397 | 76365563 ~ 76366016 (-) |
| G1410584 | NA | non-coding | upstream | 83413 | 76391579 ~ 76391896 (-) |
| G1410585 | NA | non-coding | upstream | 104246 | 76412412 ~ 76412685 (-) |
| G1410487 | LOC106566354 | other | downstream | 122877 | 76164643 ~ 76165488 (-) |
| G1410456 | NA | other | downstream | 226633 | 76061069 ~ 76061732 (-) |
| G1410288 | NA | other | downstream | 346563 | 75940707 ~ 75941802 (-) |
| G1410213 | NA | other | downstream | 423909 | 75807474 ~ 75864456 (-) |
| G1410696 | NA | other | upstream | 248874 | 76557040 ~ 76558174 (-) |
| G1410701 | NA | other | upstream | 334614 | 76642780 ~ 76645664 (-) |
| G1410773 | NA | other | upstream | 484254 | 76792420 ~ 76795053 (-) |
| G1410776 | LOC106591762 | other | upstream | 487417 | 76795583 ~ 76797111 (-) |
| G1410911 | NA | other | upstream | 653304 | 76961470 ~ 76972119 (-) |
