G1410732


Basic Information

Item Value
gene id G1410732
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 76651871 ~ 76655077 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1611947
gtttaggctactgtcattcatattccattcacccagttcagtaacctccataggtttaggctactgtcattcatattccattcacccagttctgtaacctccataggtttaggctactgtcattcatattccattcacccagttccgtaacctccataggtttaggctactgtcattcatattccattcacccagttctgtaacctccataggtttaggctactgtcattcatattccattcacccagttctgtaacctccataggtttaggctactgtcattcatattcca
>TU1611948
ctactgtcattcatattccattcacccagttctgtaacctccataggtttaggctactgtcattcatattccattcacccagttctgtaacctccataggtttaggctactgtcattcatattccattcacccagttccgtaacctccataggtttaggctactgtcattcatattccattcacccagttctgtaacctccataggtttaggctactgtcattcatattccattcacccagttctgtaacctccataggtttaggctactgtcattcatattcca
>TU1611949
ctactgtcattcatattccattcacccagttctgtaacctccataggtttaggctactgtcattcatattccattcacccagttctgtaacctccataggtttaggctactgtcattcatattccattcacccagttccgtaacctccataggtttaggctactgtcattcatattccattcacccagttccgtaacctccataggtttaggctactgtcattcatattccattcacccagttctgtaacctccataggtttaggctactgtcattcatattccattcacccagttctgtaacctccataggtttaggctactgtcattcatattcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1611947 False 292 lncRNA 0.41 2 76651871 76655077
TU1611948 False 285 lncRNA 0.41 2 76651871 76654752
TU1611949 True 338 lncRNA 0.42 2 76651871 76654752

Neighbor

gene id symbol gene type direction distance location
LOC110492709 LOC106566328 coding downstream 9777 76561257 ~ 76642094 (-)
LOC110492699 tcea2 coding downstream 532281 76104209 ~ 76119590 (-)
LOC110492917 LOC106566358 coding downstream 1036749 75600034 ~ 75615122 (-)
LOC118939468 NA coding downstream 1278966 75371620 ~ 75372905 (-)
LOC110491183 LOC106566345 coding downstream 1604898 75029607 ~ 75046973 (-)
usp21 LOC106566311 coding upstream 2826 76657903 ~ 76693758 (-)
LOC110514470 uba1 coding upstream 50712 76705789 ~ 76774764 (-)
LOC118939598 LOC106572974 coding upstream 152074 76807151 ~ 76997020 (-)
LOC110492706 LOC106566322 coding upstream 447003 77102080 ~ 77104717 (-)
LOC110491186 LOC106572997 coding upstream 483612 77138689 ~ 77144798 (-)
G1410726 NA non-coding downstream 21051 76630512 ~ 76630820 (-)
G1410725 NA non-coding downstream 21435 76630236 ~ 76630436 (-)
G1410724 NA non-coding downstream 21689 76629752 ~ 76630182 (-)
G1410722 NA non-coding downstream 25438 76626206 ~ 76626433 (-)
G1410721 NA non-coding downstream 29253 76622361 ~ 76622618 (-)
G1410739 NA non-coding upstream 19212 76674289 ~ 76674671 (-)
G1410734 NA non-coding upstream 45407 76700484 ~ 76703457 (-)
G1410750 NA non-coding upstream 93157 76748234 ~ 76749205 (-)
G1410753 NA non-coding upstream 102583 76757660 ~ 76757962 (-)
G1410763 NA non-coding upstream 120212 76775289 ~ 76775541 (-)
G1410701 NA other downstream 6207 76642780 ~ 76645664 (-)
G1410696 NA other downstream 93697 76557040 ~ 76558174 (-)
G1410557 NA other downstream 339924 76253221 ~ 76311947 (-)
G1410487 LOC106566354 other downstream 486383 76164643 ~ 76165488 (-)
G1410773 NA other upstream 137343 76792420 ~ 76795053 (-)
G1410776 LOC106591762 other upstream 140506 76795583 ~ 76797111 (-)
G1410911 NA other upstream 306393 76961470 ~ 76972119 (-)
G1411281 NA other upstream 510381 77165458 ~ 77165823 (-)
G1411366 NA other upstream 694476 77349553 ~ 77351225 (-)

Expression


Co-expression Network