G1410776 (LOC106591762)


Basic Information

Item Value
gene id G1410776
gene name LOC106591762
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 76795583 ~ 76797111 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1612024
GGGGACTGGAGCACGGAGGTGttggggtcagaggtcatggtAGTAGTACTGCTGATTGGCAGATGGACAGCGTGATCGAACAGATCGAGAAGCAAATGGCGGCGGTGCTGGAGAAGATCGAGGGGGACATGCCCTCTCTCCTGGAACAGATCAGTGACTGCCCCCCGCCACCCGAACCCCCCCGcagcacacacacctccccctcctcacGCTCCcgctcctctcatctctcccccacctcctcctccctcacctctacctcttcccccccgcccctccccacctcccccagaccccc
>TU1612023
GGGGACTGGAGCACGGAGGTGttggggtcagaggtcatggtAGTAGTACTGCTGATTGGCAGATGGACAGCGTGATCGAACAGATCGAGAAGCAAATGGCGGCGGTGCTGGAGAAGATCGAGGGGGACATGCCCTCTCTCCTGGAACAGATCAGTGACTGCCCCCCGCCACCCGAACCCCCCCGcagcacacacacctccccctcctcacGCTCCcgctcctctcatctctccccc
>TU1612022
GGGGACTGGAGCACGGAGGTGttggggtcagaggtcatggtAGTAGTACTGCTGATTGGCAGATGGACAGCGTGATCGAACAGATCGAGAAGCAAATGGCGGCGGTGCTGGAGAAGATCGAGGGGGACATGCCCTCTCTCCTGGAACAGATCAGTGACTGCCCCCCGCCACCCGAACCCCCCCGcagcacacacacctccccct
>TU1612028
GGGAGGATCCCTCTAAGTCCCTCCATAGGGATCTCTCCTTCTGCCACCAATGAACAGCGCTCTCAACCTCTCAGCCAATCAAATGCCAGTTCCAAACCTACAGGGGAGGAGCCAGAGAAGCCAGCCTTGAAGAAGACGTCAGGCAAAATGGCTGCCGCATTGGGCAAAACCAAAACAAACCCAGAGACCAAAACACTTCCTATCCCCACCGTAACCCCTGACATCACCAAACCCCAGGATCCCACCCCAATCTCCGTCCCTGAACCCAAAAGAGCAGTATCATCGTTGCCTAACAACGCTGAAAAGAAGCATCCGCCCTCTGTCGCTCCCGAGACTCCAACGACCCAACGGCGCAAGATGGCCGCCCAACTCCACAACACCGGCCCAGGCCCTGCTGCTCCTACAGCTCCTGTTGCTGCCTCTACCACTCCTACAGTCCCTGTTGCTGCCTCTACCACTCCTACAATTCCTGTTGCTGCCTCTACCACTCCTACAGTTCCTGTTGCTGCCTCTCCCACTCCTACAGCTCCTGTTGCTGCCTCTCCCACTCCTACAGCTCCTGTTACTACCACAGTGCCCCCCCCTGACAGGAGGCC

Function

NR:

description
PREDICTED: mucin-17-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1612024 False 298 TUCP 0.64 1 76795583 76795880
TU1612023 False 236 lncRNA 0.62 1 76795645 76795880
TU1612022 False 204 lncRNA 0.61 1 76795677 76795880
TU1612028 True 596 TUCP 0.57 2 76796366 76797111

Neighbor

gene id symbol gene type direction distance location
LOC110514470 uba1 coding downstream 20881 76705789 ~ 76774764 (-)
usp21 LOC106566311 coding downstream 101887 76657903 ~ 76693758 (-)
LOC110492709 LOC106566328 coding downstream 153551 76561257 ~ 76642094 (-)
LOC110492699 tcea2 coding downstream 676055 76104209 ~ 76119590 (-)
LOC110492917 LOC106566358 coding downstream 1180523 75600034 ~ 75615122 (-)
LOC118939598 LOC106572974 coding upstream 11271 76807151 ~ 76997020 (-)
LOC110492706 LOC106566322 coding upstream 306200 77102080 ~ 77104717 (-)
LOC110491186 LOC106572997 coding upstream 342809 77138689 ~ 77144798 (-)
ikbkg LOC106572992 coding upstream 697980 77493860 ~ 77582658 (-)
flna LOC100380643 coding upstream 1159719 77955599 ~ 78024979 (-)
G1410771 NA non-coding downstream 194 76779518 ~ 76795451 (-)
G1410763 NA non-coding downstream 20104 76775289 ~ 76775541 (-)
G1410753 NA non-coding downstream 37683 76757660 ~ 76757962 (-)
G1410750 NA non-coding downstream 46440 76748234 ~ 76749205 (-)
G1410734 NA non-coding downstream 92188 76700484 ~ 76703457 (-)
G1410858 NA non-coding upstream 22693 76818573 ~ 76841859 (-)
G1410859 NA non-coding upstream 23249 76819129 ~ 76857456 (-)
G1410861 NA non-coding upstream 24221 76820101 ~ 76861888 (-)
G1410887 NA non-coding upstream 96651 76892531 ~ 76893149 (-)
G1410888 NA non-coding upstream 99811 76895691 ~ 76896898 (-)
G1410773 NA other downstream 592 76792420 ~ 76795053 (-)
G1410701 NA other downstream 149981 76642780 ~ 76645664 (-)
G1410696 NA other downstream 237471 76557040 ~ 76558174 (-)
G1410557 NA other downstream 483698 76253221 ~ 76311947 (-)
G1410487 LOC106566354 other downstream 630157 76164643 ~ 76165488 (-)
G1410911 NA other upstream 165590 76961470 ~ 76972119 (-)
G1411281 NA other upstream 369578 77165458 ~ 77165823 (-)
G1411366 NA other upstream 553673 77349553 ~ 77351225 (-)
G1411862 NA other upstream 1254386 78050266 ~ 78053138 (-)
G1411845 rl10 other upstream 1261087 78056967 ~ 78067510 (-)

Expression


Co-expression Network