G1410887


Basic Information

Item Value
gene id G1410887
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 76892531 ~ 76893149 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1612177
TCCATTATATAGTCTAATAACCACTCTGTTCATTATGTAGTCTAATAACCAATCTGTTCATTATGTAGTCTAATAACCACTCTGTTCATTATGTAGTCTGTTAACCACTCTGTTCATTATGTACTCTAATAACCACTCTGTTCATTATGTAGTCTAATAACCACTCTGTTCATTATGTAGTCTGTTAACCACTATGTTCATTATGTAGTCTAATAACCACTCTGTTCATTATGTAGTCTAATAACCACTCTGTTCATTATTACTTTTAAAGATGCAGTCCTCAGTCTTTCTGACAGAAAGTGGTTGTGTGTTAATGCTTTTGCAGACACAAATGCATTTTGGCATGCGTGTTTCTCTGTGTCTGCTCTGCCCGGTCGCCATTTAAAACATGTCGGTCTGCCTAATATGGCCCTAACCTTGCGTTTTTGTCCGCTGAGAATGTTTTTAGGCATTAACAGAGATTGAGGAGTGCTGCTTTAAAATGCATCTGTCCTGATTATGTTCTCCTCTGCCTCCTTTCTCTTTTGCTCTATCa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1612177 True 535 lncRNA 0.37 3 76892531 76893149

Neighbor

gene id symbol gene type direction distance location
LOC110514470 uba1 coding downstream 117767 76705789 ~ 76774764 (-)
usp21 LOC106566311 coding downstream 198773 76657903 ~ 76693758 (-)
LOC110492709 LOC106566328 coding downstream 250437 76561257 ~ 76642094 (-)
LOC110492699 tcea2 coding downstream 772941 76104209 ~ 76119590 (-)
LOC110492917 LOC106566358 coding downstream 1277409 75600034 ~ 75615122 (-)
LOC110492706 LOC106566322 coding upstream 208931 77102080 ~ 77104717 (-)
LOC110491186 LOC106572997 coding upstream 245540 77138689 ~ 77144798 (-)
ikbkg LOC106572992 coding upstream 600711 77493860 ~ 77582658 (-)
flna LOC100380643 coding upstream 1062450 77955599 ~ 78024979 (-)
LOC118939482 NA coding upstream 1135058 78028207 ~ 78029944 (-)
G1410861 NA non-coding downstream 30643 76820101 ~ 76861888 (-)
G1410859 NA non-coding downstream 35075 76819129 ~ 76857456 (-)
G1410858 NA non-coding downstream 50672 76818573 ~ 76841859 (-)
G1410776 LOC106591762 non-coding downstream 96651 76795583 ~ 76797111 (-)
G1410771 NA non-coding downstream 97080 76779518 ~ 76795451 (-)
G1410888 NA non-coding upstream 2542 76895691 ~ 76896898 (-)
G1410890 NA non-coding upstream 7575 76900724 ~ 76911856 (-)
G1410891 NA non-coding upstream 19405 76912554 ~ 76917720 (-)
G1410912 NA non-coding upstream 64293 76957442 ~ 76964240 (-)
G1410949 NA non-coding upstream 115936 77009085 ~ 77010426 (-)
G1410773 NA other downstream 97478 76792420 ~ 76795053 (-)
G1410701 NA other downstream 246867 76642780 ~ 76645664 (-)
G1410696 NA other downstream 334357 76557040 ~ 76558174 (-)
G1410557 NA other downstream 580584 76253221 ~ 76311947 (-)
G1410911 NA other upstream 68321 76961470 ~ 76972119 (-)
G1411281 NA other upstream 272309 77165458 ~ 77165823 (-)
G1411366 NA other upstream 456404 77349553 ~ 77351225 (-)
G1411862 NA other upstream 1157117 78050266 ~ 78053138 (-)
G1411845 rl10 other upstream 1163818 78056967 ~ 78067510 (-)

Expression


Co-expression Network