Gene
RNA
| Item | Value |
|---|---|
| gene id | G1410912 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 76957442 ~ 76964240 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: protein Shroom2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1612213 | True | 626 | lncRNA | 0.48 | 3 | 76957442 | 76964240 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110514470 | uba1 | coding | downstream | 182678 | 76705789 ~ 76774764 (-) |
| usp21 | LOC106566311 | coding | downstream | 263684 | 76657903 ~ 76693758 (-) |
| LOC110492709 | LOC106566328 | coding | downstream | 315348 | 76561257 ~ 76642094 (-) |
| LOC110492699 | tcea2 | coding | downstream | 837852 | 76104209 ~ 76119590 (-) |
| LOC110492917 | LOC106566358 | coding | downstream | 1342320 | 75600034 ~ 75615122 (-) |
| LOC110492706 | LOC106566322 | coding | upstream | 137840 | 77102080 ~ 77104717 (-) |
| LOC110491186 | LOC106572997 | coding | upstream | 174449 | 77138689 ~ 77144798 (-) |
| ikbkg | LOC106572992 | coding | upstream | 529620 | 77493860 ~ 77582658 (-) |
| flna | LOC100380643 | coding | upstream | 991359 | 77955599 ~ 78024979 (-) |
| LOC118939482 | NA | coding | upstream | 1063967 | 78028207 ~ 78029944 (-) |
| G1410891 | NA | non-coding | downstream | 39722 | 76912554 ~ 76917720 (-) |
| G1410890 | NA | non-coding | downstream | 45586 | 76900724 ~ 76911856 (-) |
| G1410888 | NA | non-coding | downstream | 60544 | 76895691 ~ 76896898 (-) |
| G1410887 | NA | non-coding | downstream | 64293 | 76892531 ~ 76893149 (-) |
| G1410861 | NA | non-coding | downstream | 95554 | 76820101 ~ 76861888 (-) |
| G1410949 | NA | non-coding | upstream | 44845 | 77009085 ~ 77010426 (-) |
| G1410990 | NA | non-coding | upstream | 93915 | 77058155 ~ 77058848 (-) |
| G1410993 | NA | non-coding | upstream | 95076 | 77059316 ~ 77059969 (-) |
| G1410995 | NA | non-coding | upstream | 97375 | 77061615 ~ 77061912 (-) |
| G1410998 | NA | non-coding | upstream | 101936 | 77066176 ~ 77066476 (-) |
| G1410776 | LOC106591762 | other | downstream | 160331 | 76795583 ~ 76797111 (-) |
| G1410773 | NA | other | downstream | 162389 | 76792420 ~ 76795053 (-) |
| G1410701 | NA | other | downstream | 311778 | 76642780 ~ 76645664 (-) |
| G1410696 | NA | other | downstream | 399268 | 76557040 ~ 76558174 (-) |
| G1410557 | NA | other | downstream | 645495 | 76253221 ~ 76311947 (-) |
| G1411281 | NA | other | upstream | 201218 | 77165458 ~ 77165823 (-) |
| G1411366 | NA | other | upstream | 385313 | 77349553 ~ 77351225 (-) |
| G1411862 | NA | other | upstream | 1086026 | 78050266 ~ 78053138 (-) |
| G1411845 | rl10 | other | upstream | 1092727 | 78056967 ~ 78067510 (-) |
| G1412091 | NA | other | upstream | 1352077 | 78316317 ~ 78318998 (-) |
