G1411261


Basic Information

Item Value
gene id G1411261
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 77120487 ~ 77496723 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1612617
aattagattttttttttcttctaactaccccacggtagttattggggtcaaatttgtctccacttttgtggattggggtgatcagtccttggatccaaatattggggaagataccAGAGCTAagaatgatgttaaagagtttaagtatagccaattggaatttgttgtctgtatattttatcatttcattaaggataccatcaacaccacaggcctttttgggttggagggtttttattttgtcctgtagctcattcaatgtaattggagaacccagtgggttctggtcgtctttaatagttgattctaagatttgtatttgatcatgtatatgtttttgctctttattctttgttatagagccaaaaagattggagaagtggtttacccatacatctccattttggatagatacctcttcatgttgttgtttgtttagtgttttccaattttcccagaagtggttagattccatggattcttcagttacattgagctgatttctgatgtgctgttccttctttttccgtagtgtatttctgtattgtttcagtgattcaccatagtgaaggcgaaGACTCCGGTTTTcacgggtctctatgtttttggttagacaggtttctcaatttctttcttagatttttgcattcttcatcaaaccatttgtcattgttgttgattttattcggttttctatttgagatttttagattagatagggaagctgagaggtcaaatatactgtttaagttttctactgccaagtttacaccttcactattacagtggaacattttgtccaggaagttgtctagaagggattgaatctgttgttgtctaattgtttttggtagatttctacactactttccttccatctatagcatttcttaatgatactcagttcctttggctttgatgcctcatgatttgagtattgctctgttcaagtagactgtgattttgctgtgatctgattggggtgtcagtgggctgactgtgaacgctctgagagactctgggttgaggtcagtgataaagcagtctacagtactactgccaagagatgacctataggtgtacctaccataggagtctcctCGAAGCCTATCATTGACTAt

Function

NR:

description
PREDICTED: uncharacterized protein LOC109075231

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1612617 True 1121 lncRNA 0.37 2 77120487 77496723

Neighbor

gene id symbol gene type direction distance location
LOC110492706 LOC106566322 coding downstream 15770 77102080 ~ 77104717 (-)
LOC118939598 LOC106572974 coding downstream 123467 76807151 ~ 76997020 (-)
LOC110514470 uba1 coding downstream 345723 76705789 ~ 76774764 (-)
usp21 LOC106566311 coding downstream 426729 76657903 ~ 76693758 (-)
LOC110492709 LOC106566328 coding downstream 478393 76561257 ~ 76642094 (-)
flna LOC100380643 coding upstream 458876 77955599 ~ 78024979 (-)
LOC118939482 NA coding upstream 531484 78028207 ~ 78029944 (-)
dnase1l1 LOC106566338 coding upstream 574896 78071619 ~ 78096380 (-)
LOC110512774 LOC106566310 coding upstream 607857 78104580 ~ 78137424 (-)
ndnl2 LOC106593143 coding upstream 671242 78167965 ~ 78193667 (-)
G1411242 NA non-coding downstream 26212 77092803 ~ 77094275 (-)
G1411015 NA non-coding downstream 29963 77090266 ~ 77090524 (-)
G1411012 NA non-coding downstream 32140 77088145 ~ 77088347 (-)
G1410999 NA non-coding downstream 53670 77066601 ~ 77066817 (-)
G1411433 NA non-coding upstream 40946 77537669 ~ 77545925 (-)
G1411438 NA non-coding upstream 75221 77571944 ~ 77574399 (-)
G1411442 NA non-coding upstream 97676 77594399 ~ 77594730 (-)
G1411449 NA non-coding upstream 110542 77607265 ~ 77609322 (-)
G1411453 NA non-coding upstream 114043 77610766 ~ 77611074 (-)
G1410911 NA other downstream 148368 76961470 ~ 76972119 (-)
G1410776 LOC106591762 other downstream 323376 76795583 ~ 76797111 (-)
G1410773 NA other downstream 325434 76792420 ~ 76795053 (-)
G1410701 NA other downstream 474823 76642780 ~ 76645664 (-)
G1410696 NA other downstream 562313 76557040 ~ 76558174 (-)
G1411862 NA other upstream 553543 78050266 ~ 78053138 (-)
G1411845 rl10 other upstream 560244 78056967 ~ 78067510 (-)
G1412091 NA other upstream 819594 78316317 ~ 78318998 (-)
G1412203 LOC100136012 other upstream 1007568 78504291 ~ 78511632 (-)

Expression


Co-expression Network