G1411343


Basic Information

Item Value
gene id G1411343
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 77316195 ~ 77317524 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1612718
cagcaccgttacattagacctggacacagaaccgtttcattagaccgggacacaacaccgttacattagacccgaacacagcaccgttacattagaccgggacacagcaccgttacattagaccgggacacagcaccgttacattagaccgtgacacagcaccgttacattagaccgggacacagcaccctGTCAtcagaccgggacacagcaccgtttcattagaccggtacacagcaccgtttcattagaccgggacacaacaccgtttcattagaccggtacacagcaccgttacattagacagggacacagcaccattacattagacccgaatacagcaccgttacattagaccgggacacagcaccgttataTTAGAACGGgatacagcaccgttacattagaccgggacacagcaccgtttcattagacctggacacagcaccgttacattagacccgaatacagcaccgttacattataccgggacacaacaccgtttcattagaccgggacactgcaccgttacattagacccgaatacagcaccgttacattagaccgggacacagcaccgttacattagaccgggacacagcaccgttacattagacccgaatacagcaccgttacattagaccgggaaacagcaccgttacattagacccgaatacagcactgttacattagaccgggacacagcaccgttacatttgacagggacacagcaccgttacattagacccgaatacagcactgttacattagactgggacacagcaccgttacattagaccgggacacagcaccgttacattagacagggacacagcaccgttacattagaccgggacacagcaccgttacattagacccgaatacagc

Function

NR:

description
PREDICTED: protein IWS1 homolog A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1612718 True 888 lncRNA 0.50 2 77316195 77317524

Neighbor

gene id symbol gene type direction distance location
LOC110491186 LOC106572997 coding downstream 171397 77138689 ~ 77144798 (-)
LOC110492706 LOC106566322 coding downstream 211478 77102080 ~ 77104717 (-)
LOC118939598 LOC106572974 coding downstream 319175 76807151 ~ 76997020 (-)
LOC110514470 uba1 coding downstream 541431 76705789 ~ 76774764 (-)
usp21 LOC106566311 coding downstream 622437 76657903 ~ 76693758 (-)
ikbkg LOC106572992 coding upstream 176336 77493860 ~ 77582658 (-)
flna LOC100380643 coding upstream 638075 77955599 ~ 78024979 (-)
LOC118939482 NA coding upstream 710683 78028207 ~ 78029944 (-)
dnase1l1 LOC106566338 coding upstream 754095 78071619 ~ 78096380 (-)
LOC110512774 LOC106566310 coding upstream 787056 78104580 ~ 78137424 (-)
G1411242 NA non-coding downstream 221920 77092803 ~ 77094275 (-)
G1411015 NA non-coding downstream 225671 77090266 ~ 77090524 (-)
G1411012 NA non-coding downstream 227848 77088145 ~ 77088347 (-)
G1410999 NA non-coding downstream 249378 77066601 ~ 77066817 (-)
G1411364 NA non-coding upstream 26979 77344503 ~ 77345246 (-)
G1411385 NA non-coding upstream 67655 77385179 ~ 77385505 (-)
G1411407 NA non-coding upstream 136976 77454500 ~ 77456086 (-)
G1411417 NA non-coding upstream 157677 77475201 ~ 77475625 (-)
G1411259 NA non-coding upstream 174942 77492466 ~ 77493735 (-)
G1411281 NA other downstream 150372 77165458 ~ 77165823 (-)
G1410911 NA other downstream 344076 76961470 ~ 76972119 (-)
G1410776 LOC106591762 other downstream 519084 76795583 ~ 76797111 (-)
G1410773 NA other downstream 521142 76792420 ~ 76795053 (-)
G1410701 NA other downstream 670531 76642780 ~ 76645664 (-)
G1411366 NA other upstream 32029 77349553 ~ 77351225 (-)
G1411862 NA other upstream 732742 78050266 ~ 78053138 (-)
G1411845 rl10 other upstream 739443 78056967 ~ 78067510 (-)
G1412091 NA other upstream 998793 78316317 ~ 78318998 (-)
G1412203 LOC100136012 other upstream 1186767 78504291 ~ 78511632 (-)

Expression


Co-expression Network