G1411161


Basic Information

Item Value
gene id G1411161
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 77492694 ~ 77494341 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1612492
atttatatatttattacgtCTCTAATACAACAATTTAAAACACTCTGTACTCGAAAGACCTAGAATTACAGACAATACTCACAAATGGCCATGGTGAATTATCATGCTCTTACATACTGACAGACACCACAGGGCGGTATTCAatttgttgcaaaacgtttcctAACTTaaagcaaacagaacaaaacagggcaggacctacctgaatttgtccaatagaaacttatTTTGCTCTGTTTGCTTCAGTTTGGTTCTTAAACAGTttccgtaatgaatacaccctggtacacagggtcaggggtcagaagACTCATTTACACTTTCAGCCTGAGAGGGATagcaggaaggagggagagagagattgatatggagagaaagaaagagagatatggagagagaaagattgagcggcaggtagtctagtggctagagcgttggacttgtaactgaaaggttgctagatcaaatccccgagctgccaaggtaacaatctgtcgttctgcccctgaacaaggcagttaacccactgttcctaggccttcattgtacataagaatttgttcttaactgacttgtctagttaaataaataaaatatgtaaaGATTGatatggagagggatagagagaaaaagaggggatatggagggaggtgtgggggagGACTGTATATGgtggacagggatagagagaaaaagaggggataTGGAGGGAGGTGTGAGGGAGGACTGTATATGGTGGACAGGgatagagaaaaagaggggatatggagggaggtgggggggaggaCTGTATatggtggacagggagagagaaaaagaggggatatggagggaggtgtgggggagGACTGTATatggtggacagggagagagaggggatatggagggaggtgtgggggagGACTGTATATGGTGGACAGGGATGGGAAGGAAAGGTCTATGACAATGATGTCATCATGCTGATGAGCTATTGTTGTTTCAGCCCCCTCAAACAtctgtctaagtgtgtgtgttactggatACAGTCCATGACATGTATCTGCAGTGTGTCCATGTCGGGGGCTTGGTACTGGCACTTTGGACAGCGGTAGTCAGGAAGCTCTTCAGCCCCGCCTCCAGCCACTCCCTCTGCAGCCAATCCCACACTGCGGGCGGTGGAGTTAAAGGCACTCCCTGCGGATGAGAGACAGAAATTACTACATTTACTCCAAATTGTATCTTTTTAAAGGAAAAAGTACTCAAAGGAGcaacatagagagaggagagagag
>TU1612493
atttatatatttattacgtCTCTAATACAACAATTTAAAACACTCTGTACTCGAAAGACCTAGAATTACAGACAATACTCACAAATGGCCATGGTGAATTATCATGCTCTTACATACTGACAGACACCACAGGGCGGTATTCAatttgttgcaaaacgtttcctAACTTaaagcaaacagaacaaaacagggcaggacctacctgaatttgtccaatagaaacttatTTTGCTCTGTTTGCTTCAGTTTGGTTCTTAAACAGTttccgtaatgaatacaccctggtacacagggtcaggggtcagaagACTCATTTACACTTTCAGCCTGAGAGGGATagcaggaaggagggagagagagattgatatggagagaaagaaagagagatatggagagagaaagattgagcggcaggtagtctagtggctagagcgttggacttgtaactgaaaggttgctagatcaaatccccgagctgccaaggtaacaatctgtcgttctgcccctgaacaaggcagttaacccactgttcctaggccttcattgtacataagaatttgttcttaactgacttgtctagttaaataaataaaatatgtaaaGATTGatatggagagggatagagagaaaaagaggggatatggagggaggtgtgggggagGACTGTATATGgtggacagggatagaggggataTGGAGGGAGGTGTGAGGGAGGACTGTATATGGTGGACAGGgatagagaaaaagaggggatatggagggaggtgggggggtggactgtatatggtggacagggagagagaaaaagaggggatatggagggaggtgtgggggagGACTGTATatggtggacagggagagagaggggatatggagggaggtgtgggggagGACTGTATATGGTGGACAGGGATGGGAAGGAAAGGTCTATGACAATGATGTCATCATGCTGATGAGCTATTGTTGTTTCAGCCCCCTCAAACAtctgtctaagtgtgtgtgttactggatACAGTCCATGACATGTATCTGCAGTGTGTCCATGTCGGGGGCTTGGTACTGGCACTTTGGACAGCGGTAGTCAGGAAGCTCTTCAGCCCCGCCTCCAGCCACTCCCTCTGCAGCCAATCCCACACTGCGGGCGGTGGAGTTAAAGGCACTCCCTGCGGATGAGAGACAGAAATTACTACATTTACTCCAAATTGTATCTTTTTAAAGGAAAAAGTACTCAAAGGAGcaacatagagagaggagagagag
>TU1612495
atttatatatttattacgtCTCTAATACAACAATTTAAAACACTCTGTACTCGAAAGACCTAGAATTACAGACAATACTCACAAATGGCCATGGTGAATTATCATGCTCTTACATACTGACAGACACCACAGGGCGGTATTCAatttgttgcaaaacgtttcctAACTTaaagcaaacagaacaaaacagggcaggacctacctgaatttgtccaatagaaacttatTTTGCTCTGTTTGCTTCAGTTTGGTTCTTAAACAGTttccgtaatgaatacaccctggtacacagggtcaggggtcagaagACTCATTTACACTTTCAGCCTGAGAGGGATagcaggaaggagggagagagagattgatatggagagaaagaaagagagatatggagagagaaagattgagcggcaggtagtctagtggctagagcgttggacttgtaactgaaaggttgctagatcaaatccccgagctgccaaggtaacaatctgtcgttctgcccctgaacaaggcagttaacccactgttcctaggccttcattgtacataagaatttgttcttaactgacttgtctagttaaataaataaaatatgtaaaGATTGatatggagagggatagagagaaaaagaggggatatggagggaggtgtgggggagGACTGTATATGgtggacagggatagaggggataTGGAGGGAGgtgtgggggagGACTGTATatggtggacagggagagagagagaaaaagaggggatatggagggaggtgtgggggagGACTGTATATGGTGGACAGGGATGGGAAGGAAAGGTCTATGACAATGATGTCATCATGCTGATGAGCTATTGTTGTTTCAGCCCCCTCAAACAtctgtctaagtgtgtgtgttactggatACAGTCCATGACATGTATCTGCAGTGTGTCCATGTCGGGGGCTTGGTACTGGCACTTTGGACAGCGGTAGTCAGGAAGCTCTTCAGCCCCGCCTCCAGCCACTCCCTCTGCAGCCAATCCCACACTGCGGGCGGTGGAGTTAAAGGCACTCCCTGCGGATGAGAGACAGAAATTACTACATTTACTCCAAATTGTATCTTTTTAAAGGAAAAAGTACTCAAAGGAGcaacatagagagaggagagagag
>TU1612496
atttatatatttattacgtCTCTAATACAACAATTTAAAACACTCTGTACTCGAAAGACCTAGAATTACAGACAATACTCACAAATGGCCATGGTGAATTATCATGCTCTTACATACTGACAGACACCACAGGGCGGTATTCAatttgttgcaaaacgtttcctAACTTaaagcaaacagaacaaaacagggcaggacctacctgaatttgtccaatagaaacttatTTTGCTCTGTTTGCTTCAGTTTGGTTCTTAAACAGTttccgtaatgaatacaccctggtacacagggtcaggggtcagaagACTCATTTACACTTTCAGCCTGAGAGGGATagcaggaaggagggagagagagattgatatggagagaaagaaagagagatatggagagagaaagattgagcggcaggtagtctagtggctagagcgttggacttgtaactgaaaggttgctagatcaaatccccgagctgccaaggtaacaatctgtcgttctgcccctgaacaaggcagttaacccactgttcctaggccttcattgtacataagaatttgttcttaactgacttgtctagttaaataaataaaatatgtaaaGATTGatatggagagggatagagagaaaaagaggggatatggagggaggtgtgggggagGACTGTATATGgtggacagggatagaggggatatggagggaggtgtgggggagGACTGTATatggtggacagggagagagaggggatatggagggaggtgtgggggagGACTGTATATGGTGGACAGGGATGGGAAGGAAAGGTCTATGACAATGATGTCATCATGCTGATGAGCTATTGTTGTTTCAGCCCCCTCAAACAtctgtctaagtgtgtgtgttactggatACAGTCCATGACATGTATCTGCAGTGTGTCCATGTCGGGGGCTTGGTACTGGCACTTTGGACAGCGGTAGTCAGGAAGCTCTTCAGCCCCGCCTCCAGCCACTCCCTCTGCAGCCAATCCCACACTGCGGGCGGTGGAGTTAAAGGCACTCCCTGCGGATGAGAGACAGAAATTACTACATTTACTCCAAATTGTATCTTTTTAAAGGAAAAAGTACTCAAAGGAGcaacatagagagaggagagagag
>TU1612498
atttatatatttattacgtCTCTAATACAACAATTTAAAACACTCTGTACTCGAAAGACCTAGAATTACAGACAATACTCACAAATGGCCATGGTGAATTATCATGCTCTTACATACTGACAGACACCACAGGGCGGTATTCAatttgttgcaaaacgtttcctAACTTaaagcaaacagaacaaaacagggcaggacctacctgaatttgtccaatagaaacttatTTTGCTCTGTTTGCTTCAGTTTGGTTCTTAAACAGTttccgtaatgaatacaccctggtacacagggtcaggggtcagaagACTCATTTACACTTTCAGCCTGAGAGGGATagcaggaaggagggagagagagattgatatggagagaaagaaagagagatatggagagagaaagattgagcggcaggtagtctagtggctagagcgttggacttgtaactgaaaggttgctagatcaaatccccgagctgccaaggtaacaatctgtcgttctgcccctgaacaaggcagttaacccactgttcctaggccttcattgtacataagaatttgttcttaactgacttgtctagttaaataaataaaatatgtaaaGATTGatatggagagggatagagagaaaaagaggggatatggagggaggtgtgggggagGACTGTATATGgtggacagggatagagagaaaaagaggggataTGGAGGGAGGTGTGAGGGAGGACTGTATATGGTGGACAGGgatagaggggataTGGAGGGAGGTGTGAGGGAGGACTGTATATGGTGGACAGGgatagagagagaaaaagaggggatatggagggaggtgtgggggagGACTGTATATGGTGGACAGGGATGGGAAGGAAAGGTCTATGACAATGATGTCATCATGCTGATGAGCTATTGTTGTTTCAGCCCCCTCAAACAtctgtctaagtgtgtgtgttactggatACAGTCCATGACATGTATCTGCAGTGTGTCCATGTCGGGGGCTTGGTACTGGCACTTTGGACAGCGGTAGTCAGGAAGCTCTTCAGCCCCGCCTCCAGCCACTCCCTCTGCAGCCAATCCCACACTGCGGGCGGTGGAGTTAAAGGCACTCCCTGCGGATGAGAGACAGAAATTACTACATTTACTCCAAATTGTATCTTTTTAAAGGAAAAAGTACTCAAAGGAGcaacatagagagaggagagagag
>TU1612501
atttatatatttattacgtCTCTAATACAACAATTTAAAACACTCTGTACTCGAAAGACCTAGAATTACAGACAATACTCACAAATGGCCATGGTGAATTATCATGCTCTTACATACTGACAGACACCACAGGGCGGTATTCAatttgttgcaaaacgtttcctAACTTaaagcaaacagaacaaaacagggcaggacctacctgaatttgtccaatagaaacttatTTTGCTCTGTTTGCTTCAGTTTGGTTCTTAAACAGTttccgtaatgaatacaccctggtacacagggtcaggggtcagaagACTCATTTACACTTTCAGCCTGAGAGGGATagcaggaaggagggagagagagattgatatggagagaaagaaagagagatatggagagagaaagattgagcggcaggtagtctagtggctagagcgttggacttgtaactgaaaggttgctagatcaaatccccgagctgccaaggtaacaatctgtcgttctgcccctgaacaaggcagttaacccactgttcctaggccttcattgtacataagaatttgttcttaactgacttgtctagttaaataaataaaatatgtaaaGATTGatatggagagggatagagagaaaaagaggggatatggagggaggtgtgggggagGACTGTATATGgtggacagggagagagagagaaaaagaggggatatggagggaggtgtgggggagGACTGTATatggtggacagggagagagaggggatatggagggaggtgtgggggagGACTGTATATGGTGGACAGGGATGGGAAGGAAAGGTCTATGACAATGATGTCATCATGCTGATGAGCTATTGTTGTTTCAGCCCCCTCAAACAtctgtctaagtgtgtgtgttactggatACAGTCCATGACATGTATCTGCAGTGTGTCCATGTCGGGGGCTTGGTACTGGCACTTTGGACAGCGGTAGTCAGGAAGCTCTTCAGCCCCGCCTCCAGCCACTCCCTCTGCAGCCAATCCCACACTGCGGGCGGTGGAGTTAAAGGCACTCCCTGCGGATGAGAGACAGAAATTACTACATTTACTCCAAATTGTATCTTTTTAAAGGAAAAAGTACTCAAAGGAGcaacatagagagaggagagagag

Function

NR:

description
PREDICTED: NF-kappa-B essential modulator

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1612492 False 1270 TUCP 0.46 2 77492694 77494341
TU1612493 False 1260 TUCP 0.46 3 77492694 77494341
TU1612495 False 1148 TUCP 0.45 3 77492694 77494341
TU1612496 False 1138 lncRNA 0.45 3 77492694 77494341
TU1612498 False 1211 TUCP 0.45 3 77492694 77494341
TU1612501 True 1150 lncRNA 0.45 4 77492694 77494341
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Neighbor

gene id symbol gene type direction distance location
LOC110515522 LOC106566305 coding upstream 45618 77347958 ~ 77447742 (+)
LOC110492710 tkt coding upstream 935275 76542338 ~ 76557419 (+)
LOC118939597 NA coding upstream 1073687 76416005 ~ 76419007 (+)
LOC110491187 NA coding upstream 1078269 76311927 ~ 76414425 (+)
LOC110492698 LOC106566354 coding upstream 1324611 76164892 ~ 76168083 (+)
LOC110492713 LOC106566291 coding downstream 117321 77611662 ~ 77648542 (+)
LOC110515266 atp2b3 coding downstream 163270 77657611 ~ 77832559 (+)
LOC110519365 NA coding downstream 259882 77754223 ~ 77758403 (+)
haus7 haus7 coding downstream 433827 77928168 ~ 77942829 (+)
LOC110532872 rl10 coding downstream 564904 78059245 ~ 78067417 (+)
G1411199 NA non-coding upstream 5902 77486010 ~ 77486792 (+)
G1411193 NA non-coding upstream 20807 77471617 ~ 77471887 (+)
G1411130 NA non-coding upstream 141464 77349553 ~ 77351230 (+)
G1411128 NA non-coding upstream 143978 77348436 ~ 77348716 (+)
G1411075 NA non-coding upstream 257520 77210729 ~ 77235174 (+)
G1411166 NA non-coding downstream 2097 77496438 ~ 77497716 (+)
G1411227 NA non-coding downstream 76890 77571231 ~ 77573731 (+)
G1411226 NA non-coding downstream 78045 77572386 ~ 77572929 (+)
G1411232 NA non-coding downstream 85838 77580179 ~ 77580854 (+)
G1411451 NA non-coding downstream 116117 77610458 ~ 77610681 (+)
G1410994 NA other upstream 430600 77061502 ~ 77062094 (+)
G1410829 NA other upstream 520351 76961443 ~ 76972343 (+)
G1410827 NA other upstream 523707 76958730 ~ 76971677 (+)
G1411664 NA other downstream 628969 78123310 ~ 78123962 (+)
G1411988 ccdc115 other downstream 909850 78404191 ~ 78413546 (+)
G1410828 NA other upstream 525060 76961530 ~ 76967634 (+)

Expression

G1411161 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
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G1411161 Expression in each Bioproject

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G1411161 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network