G1411442



Basic Information


Item Value
gene id G1411442
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 77594399 ~ 77594730 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1612851
ggagacaTATACTCGGAAtatggaggaggaatggagggaaaaagagaggcagaggaggtctaagagagagagggaggaagaggaggtctaagagagagagggaggattaaGGTGAGCTCGAGTCATTTAAAAATGGTGTAAAAAACGGAGATGTTAAAGTGGTAGAAAATGTAAGCAGAGTGAGTTGAATACAGGAGGAGGAATGGAAGTGAAGGAGGGTGAAGTATCTgaggtggtaggtgtggtgaagttctcGGAGACCGAGGCTTACACCGAGGGTCAGGTTAAAGATGATTCTACGTTAGTAGGAGTGACGTTTTTGGAAAAAGTGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1612851 True 332 lncRNA 0.46 1 77594399 77594730

Neighbor


gene id symbol gene type direction distance location
ikbkg LOC106572992 coding downstream 11741 77493860 ~ 77582658 (-)
LOC110491186 LOC106572997 coding downstream 449601 77138689 ~ 77144798 (-)
LOC110492706 LOC106566322 coding downstream 489682 77102080 ~ 77104717 (-)
LOC118939598 LOC106572974 coding downstream 597379 76807151 ~ 76997020 (-)
LOC110514470 uba1 coding downstream 819635 76705789 ~ 76774764 (-)
flna LOC100380643 coding upstream 360869 77955599 ~ 78024979 (-)
LOC118939482 NA coding upstream 433477 78028207 ~ 78029944 (-)
dnase1l1 LOC106566338 coding upstream 476889 78071619 ~ 78096380 (-)
LOC110512774 LOC106566310 coding upstream 509850 78104580 ~ 78137424 (-)
ndnl2 LOC106593143 coding upstream 573235 78167965 ~ 78193667 (-)
G1411438 NA non-coding downstream 20000 77571944 ~ 77574399 (-)
G1411433 NA non-coding downstream 48474 77537669 ~ 77545925 (-)
G1411259 NA non-coding downstream 100664 77492466 ~ 77493735 (-)
G1411417 NA non-coding downstream 118774 77475201 ~ 77475625 (-)
G1411407 NA non-coding downstream 138313 77454500 ~ 77456086 (-)
G1411449 NA non-coding upstream 12535 77607265 ~ 77609322 (-)
G1411453 NA non-coding upstream 16036 77610766 ~ 77611074 (-)
G1411474 NA non-coding upstream 16473 77611203 ~ 77611564 (-)
G1411498 LOC106566291 non-coding upstream 53339 77648069 ~ 77653082 (-)
G1411740 NA non-coding upstream 133760 77728490 ~ 77729372 (-)
G1411366 NA other downstream 243174 77349553 ~ 77351225 (-)
G1411281 NA other downstream 428576 77165458 ~ 77165823 (-)
G1410911 NA other downstream 622280 76961470 ~ 76972119 (-)
G1410776 LOC106591762 other downstream 797288 76795583 ~ 76797111 (-)
G1410773 NA other downstream 799346 76792420 ~ 76795053 (-)
G1411862 NA other upstream 455536 78050266 ~ 78053138 (-)
G1411845 rl10 other upstream 462237 78056967 ~ 78067510 (-)
G1412091 NA other upstream 721587 78316317 ~ 78318998 (-)
G1412203 LOC100136012 other upstream 909561 78504291 ~ 78511632 (-)

Expression



Co-expression Network