XLOC_033121 (BX005101.1)


Basic Information

Item Value
gene id XLOC_033121
gene name BX005101.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 46168017 ~ 46251940 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064371
CCACCTATTCACTTCCAATAGACTCAGGAAGTAAACAGCAATTAGTGATTCGGTACATCAGTTATCCGCGTTGCTTTTGCTGGAGCAGATGTCTAAAATgGTCACCAGAGAGCGCTCCAGAAGTACAGGCAGATGGCTCACACCCTACACGCTCAAAACACTGTGACAATCCCCAACAGCTCCTCCGAGAGAAGGGACACACACGGCATCTCCTAATAAGTGGCAGTGCTGAAAGCGGAGTCGTCAGCACCATGGATAATGCATGACGGCTTGGCAAACCTTCAGCACCTCGGACAGCGGCGGCACCGCGTCAAGCAGCAATGCCTCTTCTGACAGCACAACTCAATATAGCTGTACAATGTTTTAACTCAACTCTTGGCAAGTGGGAAATGTGAGGCCTGCTGAAATCtgagaagcacagaatatgccgTGTAAACCTTCTGTCTACATTGCAGGGTAATTTTTGGCTCCCCTGTCTGCTGGTGAAGAGTGCAGAGCTGAATGACAATGCAATGTCTGTTGAGTTCTGCTTAAGGTGGAGAGATGTGATGTAAATGAGGGCATGCTAACAAATTTAACAGAAAACCATCAGTCTTGTGTTtaaattaagatgttttattttttaaaggttaaAGTTGTAGGTCACAATTCTAAAGGTGTTTCAATTTATATGGGTTTCTATGGGATTTTTGGTTTTACATTATATTAGTAAGGAGGAGCAAAGACAATATTAGaactattacatttatttaagatTATGGAGAAAATTATTACACTTTGGTACTCACTTTAAAAAACTACTGTGTCAAAActttgtaaacataaaaaaacaaatcatacatatcgataataaaaacatattattttagagtttttttttctagtcATGTAATagatatacaaacaaataaataaatgctaatc

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097631

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064371 True 924 processed_transcript 0.39 3 46168017 46251940

Neighbor

gene id symbol gene type direction distance location
XLOC_033120 ca16b coding downstream 5432 45951893 ~ 46162585 (-)
XLOC_033119 tardbp coding downstream 218896 45937777 ~ 45949121 (-)
XLOC_033118 NA coding downstream 238842 45923942 ~ 45929175 (-)
XLOC_033117 epha2a coding downstream 262271 45874595 ~ 45905746 (-)
XLOC_033116 rbm19 coding downstream 298853 45843193 ~ 45869164 (-)
XLOC_033123 CU041346.1 coding upstream 42421 46294361 ~ 46310011 (-)
XLOC_033124 camk1a coding upstream 101970 46353910 ~ 46403475 (-)
XLOC_033125 rdh20 coding upstream 206476 46458416 ~ 46474483 (-)
XLOC_033126 kcnb1 coding upstream 255669 46507609 ~ 46565466 (-)
XLOC_033127 ptgis coding upstream 316179 46568119 ~ 46589726 (-)
XLOC_033111 NA non-coding downstream 2165475 43979711 ~ 44002542 (-)
XLOC_033106 BX927362.1 non-coding downstream 2818931 43346929 ~ 43349086 (-)
XLOC_033102 NA non-coding downstream 3095135 43057462 ~ 43072882 (-)
XLOC_033085 NA non-coding downstream 4715129 41451670 ~ 41452888 (-)
XLOC_033135 CABZ01055240.1 non-coding upstream 904362 47156302 ~ 47156416 (-)
XLOC_033138 AL929512.1 non-coding upstream 1350659 47602599 ~ 47602715 (-)
XLOC_033141 NA non-coding upstream 1727365 47979305 ~ 48061659 (-)
XLOC_033145 CU469362.1 non-coding upstream 2128305 48380245 ~ 48381223 (-)

Expression


Co-expression Network