G1411813


Basic Information

Item Value
gene id G1411813
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 77945584 ~ 77946509 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1613340
cacattggattctagtgaagtaacccttatggacctcactatctggcacattgaattctagtgtagtaacccttatggacctcactatctggcacattgaattctagtgtagtaacccttatggacctcactatctggcacattgaattctagtgtagtaacccttatggacctcactatctggcacattgaattctagtgtagtaacccttatggacctcacattgaattctagtgtagtaacccttatggacctcacATTGAATTAtagtgtagtaacccttatggacctcacattgaattctagtgtagtaacccttatggacctcactatctcCTGCATTGAAGAACTCCGGGTTCAGTGAATTATCACTTCTACCTCTAATCAGCAATCATAGGATTAATTCATGCTCCTTAGATGCCAGGTTAGGGTTACACACTCATTTTCGGTCATGGTCTATGGACCCCATGAAGTAGCCTTGACCACCCCCTGTATACAACTCTAGTTCCGCAACTGGACACAGTGCATTCAGttatctacacacaacaccccattatCACCAAGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1613340 True 568 lncRNA 0.42 2 77945584 77946509

Neighbor

gene id symbol gene type direction distance location
ikbkg LOC106572992 coding downstream 362926 77493860 ~ 77582658 (-)
LOC110491186 LOC106572997 coding downstream 800786 77138689 ~ 77144798 (-)
LOC110492706 LOC106566322 coding downstream 840867 77102080 ~ 77104717 (-)
LOC118939598 LOC106572974 coding downstream 948564 76807151 ~ 76997020 (-)
LOC110514470 uba1 coding downstream 1170820 76705789 ~ 76774764 (-)
flna LOC100380643 coding upstream 9090 77955599 ~ 78024979 (-)
LOC118939482 NA coding upstream 81698 78028207 ~ 78029944 (-)
dnase1l1 LOC106566338 coding upstream 125110 78071619 ~ 78096380 (-)
LOC110512774 LOC106566310 coding upstream 158071 78104580 ~ 78137424 (-)
ndnl2 LOC106593143 coding upstream 221456 78167965 ~ 78193667 (-)
G1411812 NA non-coding downstream 651 77944245 ~ 77944933 (-)
G1411811 NA non-coding downstream 1605 77943748 ~ 77943979 (-)
G1411807 NA non-coding downstream 7667 77936679 ~ 77937917 (-)
G1411799 NA non-coding downstream 17625 77927653 ~ 77927959 (-)
G1411767 NA non-coding downstream 153616 77791220 ~ 77791968 (-)
G1411817 NA non-coding upstream 2942 77949451 ~ 77949666 (-)
G1411819 NA non-coding upstream 4718 77951227 ~ 77952505 (-)
G1411861 NA non-coding upstream 98805 78045314 ~ 78045644 (-)
G1411850 LOC106592737 non-coding upstream 118009 78064518 ~ 78065283 (-)
G1411845 rl10 non-coding upstream 119528 78056967 ~ 78067510 (-)
G1411366 NA other downstream 594359 77349553 ~ 77351225 (-)
G1411281 NA other downstream 779761 77165458 ~ 77165823 (-)
G1410911 NA other downstream 973465 76961470 ~ 76972119 (-)
G1410776 LOC106591762 other downstream 1148473 76795583 ~ 76797111 (-)
G1410773 NA other downstream 1150531 76792420 ~ 76795053 (-)
G1411862 NA other upstream 103757 78050266 ~ 78053138 (-)
G1412091 NA other upstream 369808 78316317 ~ 78318998 (-)
G1412203 LOC100136012 other upstream 557782 78504291 ~ 78511632 (-)

Expression


Co-expression Network