G1411819


Basic Information

Item Value
gene id G1411819
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 77951227 ~ 77952505 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1613351
TTATGAATCTTGCAGGAAGGTTGTCCAGCCCAGTTGCTTTGTTGGTGCTCATCAAGCATAGTAGATTGGCAACATTGTCCACTGTCACCTCCTCTGTCACAGCTCAAACTAATCATTAGTGATCCTTTGATGTGGTACAAGTTGATAATAAAGACTggccatagtgtccagagcaggTGGGTAACTTCTTAACCAGAGATGAGGCTGAGAGTGGTTAAAACTGTGTTAAAATTATTAGCAACCTTTGCCTTGTCATAGCATAAACATAATCAATATCCAGGCCAATACTACAGGGATTTACCGTATCATCATCAATATCCAGGCCAATACTACAGGATTTTACCGTATCATCATCAATATCCAGGCCAATACTACAGGATTTTACCGTATCATCATCAATATCCAGGCCAATACTACAGGATTTTACCGTATCATCATCAATATCCAGGCCAATACTACAGGATTTTACCGTATCATCATCAATATCCAGGCCAAAACTACAGGATTTTACCGTATCATCATCAATATCCAGGCCAAAACTACAGGATTTTACTGTATCATCATCAATATCCAGGCCAATACTACAGGATTTTAccgtatcatcatcatcatcaatatccaGGCCAATACTACAGGATTTTACCGTATCATCATCAATATCCAGGCCAAAACTACAGGATTTTACTGTATCATCATCAATATCCAGGCCAAAACTACAGGATTTTACCGTATCATCATCAATATCCAGGCCAAAACTACAGGATTTTACCGTATCATCATCAATATCCAGGCCAATACTACAGGATTTTACCTTACCATCATCAATATCCAGGCCAAAACTACAGGATTTTAccgtatcatcatcatcatcatcaatatccaGGCCAAAACTACAGGATTTTACC

Function

NR:

description
PREDICTED: RNA-binding protein 12B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1613351 True 905 lncRNA 0.39 3 77951227 77952505
Loading

Neighbor

gene id symbol gene type direction distance location
ikbkg LOC106572992 coding downstream 368569 77493860 ~ 77582658 (-)
LOC110491186 LOC106572997 coding downstream 806429 77138689 ~ 77144798 (-)
LOC110492706 LOC106566322 coding downstream 846510 77102080 ~ 77104717 (-)
LOC118939598 LOC106572974 coding downstream 954207 76807151 ~ 76997020 (-)
LOC110514470 uba1 coding downstream 1176463 76705789 ~ 76774764 (-)
flna LOC100380643 coding upstream 3094 77955599 ~ 78024979 (-)
LOC118939482 NA coding upstream 75702 78028207 ~ 78029944 (-)
dnase1l1 LOC106566338 coding upstream 119114 78071619 ~ 78096380 (-)
LOC110512774 LOC106566310 coding upstream 152075 78104580 ~ 78137424 (-)
ndnl2 LOC106593143 coding upstream 215460 78167965 ~ 78193667 (-)
G1411817 NA non-coding downstream 1561 77949451 ~ 77949666 (-)
G1411813 NA non-coding downstream 4718 77945584 ~ 77946509 (-)
G1411812 NA non-coding downstream 6294 77944245 ~ 77944933 (-)
G1411811 NA non-coding downstream 7248 77943748 ~ 77943979 (-)
G1411807 NA non-coding downstream 13310 77936679 ~ 77937917 (-)
G1411861 NA non-coding upstream 92809 78045314 ~ 78045644 (-)
G1411850 LOC106592737 non-coding upstream 112013 78064518 ~ 78065283 (-)
G1411845 rl10 non-coding upstream 113532 78056967 ~ 78067510 (-)
G1411867 NA non-coding upstream 115063 78067568 ~ 78067842 (-)
G1411876 NA non-coding upstream 164241 78116746 ~ 78120205 (-)
G1411366 NA other downstream 600002 77349553 ~ 77351225 (-)
G1411281 NA other downstream 785404 77165458 ~ 77165823 (-)
G1410911 NA other downstream 979108 76961470 ~ 76972119 (-)
G1410776 LOC106591762 other downstream 1154116 76795583 ~ 76797111 (-)
G1410773 NA other downstream 1156174 76792420 ~ 76795053 (-)
G1411862 NA other upstream 97761 78050266 ~ 78053138 (-)
G1412091 NA other upstream 363812 78316317 ~ 78318998 (-)
G1412203 LOC100136012 other upstream 551786 78504291 ~ 78511632 (-)

Expression

G1411819 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
End of interactive chart.

G1411819 Expression in each Bioproject

Bar chart with 15 bars.
G1411819 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 80.
End of interactive chart.

Co-expression Network