G1411850 (LOC106592737)


Basic Information

Item Value
gene id G1411850
gene name LOC106592737
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 78064518 ~ 78065283 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1613397
CATACACAACCACAGAGTTACTGTCTGCAGCCATTGCACACCAGAACCGCACGTCAGCGGGACTGGTCGGCTTAATAAGCTGCAGGTGTGTTTTATGAGTTTAGAACAGTGCTGTACCTGTCAGCCCCAGCGCAGGACAACATCTTGTTGATACGGATGACATGGAAGGGGTGCAGGCGGACCCGGATGTGGAAGCCGTCCTTTCCACAGGTCTTCACCATGTACTTGTTGGCACAGATACGGGCTGCCTCCAGAGCAGAGGACAGCTGCTCGTACTCGTCAGAGACCATGTGACCACACAGAGGGAACTCGTCCACCCTGGCCTTCTTCCTGCCCAGGTCAAAGATCCTAATCTTAGGATCTAGAGGTAAATAACAAGAGAGAGTTTACAAGAGGTAATTGTTCATGTTGGTCTGAAtgtcgtaaaaaaaaaaaaaaagtacacttTGCAGAAATCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1613397 True 458 lncRNA 0.49 3 78064518 78065283

Neighbor

gene id symbol gene type direction distance location
LOC118939482 NA coding downstream 34574 78028207 ~ 78029944 (-)
flna LOC100380643 coding downstream 39539 77955599 ~ 78024979 (-)
ikbkg LOC106572992 coding downstream 481860 77493860 ~ 77582658 (-)
LOC110491186 LOC106572997 coding downstream 919720 77138689 ~ 77144798 (-)
LOC110492706 LOC106566322 coding downstream 959801 77102080 ~ 77104717 (-)
dnase1l1 LOC106566338 coding upstream 6336 78071619 ~ 78096380 (-)
LOC110512774 LOC106566310 coding upstream 39297 78104580 ~ 78137424 (-)
ndnl2 LOC106593143 coding upstream 102682 78167965 ~ 78193667 (-)
LOC110492727 NA coding upstream 136602 78201885 ~ 78203768 (-)
LOC110492720 LOC106573003 coding upstream 140856 78206139 ~ 78314948 (-)
G1411861 NA non-coding downstream 18874 78045314 ~ 78045644 (-)
G1411819 NA non-coding downstream 112013 77951227 ~ 77952505 (-)
G1411817 NA non-coding downstream 114852 77949451 ~ 77949666 (-)
G1411813 NA non-coding downstream 118009 77945584 ~ 77946509 (-)
G1411812 NA non-coding downstream 119585 77944245 ~ 77944933 (-)
G1411845 rl10 non-coding upstream 754 78056967 ~ 78067510 (-)
G1411867 NA non-coding upstream 2285 78067568 ~ 78067842 (-)
G1411876 NA non-coding upstream 51463 78116746 ~ 78120205 (-)
G1411896 NA non-coding upstream 82036 78147319 ~ 78147782 (-)
G1411906 NA non-coding upstream 103194 78168477 ~ 78172534 (-)
G1411862 NA other downstream 11380 78050266 ~ 78053138 (-)
G1411366 NA other downstream 713293 77349553 ~ 77351225 (-)
G1411281 NA other downstream 898695 77165458 ~ 77165823 (-)
G1410911 NA other downstream 1092399 76961470 ~ 76972119 (-)
G1410776 LOC106591762 other downstream 1267407 76795583 ~ 76797111 (-)
G1412091 NA other upstream 251034 78316317 ~ 78318998 (-)
G1412203 LOC100136012 other upstream 439008 78504291 ~ 78511632 (-)

Expression


Co-expression Network