G1411876


Basic Information

Item Value
gene id G1411876
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 78116746 ~ 78120205 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1613426
actctgtaccagtaccccctgtatatagcctccacattgactctgtaccagtaccccctatatatagcctccacattgactctgtactggtaccccctgtatatagcctccacattgactctgtactggtaccccctgtatatagcctccacattgactctgtaccagtaccctctgtatatagtctccacattgactctgtaccggtaccccctgtatatag
>TU1613427
ttgactctgtaccagtaccccctgtatatagcctccacattgactctgtaccagtaccccctgtatatagcctccacattgactctgtactggtaccccctgtatatagcctccacattgactctgtactggtaccctctgtatatagcctccacattgactctgtaccagtaccccctgtatatagcctccacattgactctgtactggtaccccctgtatatagcctccacattgactctgtaccggtaccctctgtatatagcctccacattgactctgtaccagtacccctgtatatagtctccacattgactctgtaccagtaccctctgtatatagtctccacattgactctgtaccggtaccccctgtatatag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1613426 False 223 lncRNA 0.48 2 78116746 78120205
TU1613427 True 381 lncRNA 0.48 2 78116746 78118921

Neighbor

gene id symbol gene type direction distance location
dnase1l1 LOC106566338 coding downstream 20366 78071619 ~ 78096380 (-)
LOC118939482 NA coding downstream 86802 78028207 ~ 78029944 (-)
flna LOC100380643 coding downstream 91767 77955599 ~ 78024979 (-)
ikbkg LOC106572992 coding downstream 534088 77493860 ~ 77582658 (-)
LOC110491186 LOC106572997 coding downstream 971948 77138689 ~ 77144798 (-)
ndnl2 LOC106593143 coding upstream 47760 78167965 ~ 78193667 (-)
LOC110492727 NA coding upstream 81680 78201885 ~ 78203768 (-)
LOC110492720 LOC106573003 coding upstream 85934 78206139 ~ 78314948 (-)
LOC110492722 LOC106566331 coding upstream 203872 78324077 ~ 78381586 (-)
ccdc115 ccdc115 coding upstream 283965 78404170 ~ 78414670 (-)
G1411867 NA non-coding downstream 48904 78067568 ~ 78067842 (-)
G1411845 rl10 non-coding downstream 49236 78056967 ~ 78067510 (-)
G1411850 LOC106592737 non-coding downstream 51463 78064518 ~ 78065283 (-)
G1411861 NA non-coding downstream 71102 78045314 ~ 78045644 (-)
G1411819 NA non-coding downstream 164241 77951227 ~ 77952505 (-)
G1411896 NA non-coding upstream 27114 78147319 ~ 78147782 (-)
G1411906 NA non-coding upstream 48272 78168477 ~ 78172534 (-)
G1411909 NA non-coding upstream 58600 78178805 ~ 78179268 (-)
G1411857 NA non-coding upstream 74659 78194864 ~ 78195637 (-)
G1412102 NA non-coding upstream 125957 78246162 ~ 78247398 (-)
G1411862 NA other downstream 63608 78050266 ~ 78053138 (-)
G1411366 NA other downstream 765521 77349553 ~ 77351225 (-)
G1411281 NA other downstream 950923 77165458 ~ 77165823 (-)
G1410911 NA other downstream 1144627 76961470 ~ 76972119 (-)
G1412091 NA other upstream 196112 78316317 ~ 78318998 (-)
G1412203 LOC100136012 other upstream 384086 78504291 ~ 78511632 (-)

Expression


Co-expression Network