XLOC_033123 (CU041346.1)


Basic Information

Item Value
gene id XLOC_033123
gene name CU041346.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 46294361 ~ 46310011 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064373
CTGGCAGGGAAGTGACGGGTACAATAACAAACCTGTTGATCATTTGGAGCAGCTGAAGTGGGTTTCTCCGAACTTCCAGACTGTCTTGAGTCGCGACGTGTCGAAAAGTACTTCTACCTGTCAGATGACGTAAAGGAGGAAGCGGCGTGTGATTGGCCGATCGTGTCTCAGCGGGAACATTTACGGATGACATCACCATGGCCTACCTGTGATGCACTAAGTCCTGGACTGCTGATGTCTCCTTCTTCCTCCTGCTCCCTCTTTAAACATGCCAACATCCGCAGCTCATCTTCCTCATCCTCTTCGTCTTGACTTCTCAGATCACACCTGCTGGAGCCCAAAGGTTGAACCCTCCCATCGACACTCACCTGTAAACCCCAAAAATCTCATTACTTCATCGGTGCCACTTTGTAATGAGACTGATCGTTACAGGGTATAGCTAATTAGCGAGCAATCAATCAAAGCTTGCCAGCTAATTGGCACCCCCATTAAGGCCAAGACATCAGCAGGGATGGTTGCCTGCTGCTAAGAAATCCACTTATACCAAGTCCTACCTGGATCACGAGCGACCTTCCAGATCAGCTTTGCAAACTTCAGCAGCATCAAAGATATGTGCCATGTTTAAATGGGAGAACGCAGCGTTATGGGGCATCCGTAATGATTCTCAGTAATTCCCACATCAAACTCTATAAGACGTTTAGCTAATCACCGTTTCAGTCCTACGGTGAGAGACTGTGGTGGTTGTGCTCAATGCTTGGACCAGTTTTAGTTGGTGTTTAACAAACTAAAAGAGGAAATAACAGTAATGAGTTCTCTTTGATATCCCAGTGGTTTCTCCTGGGCAAGGAGGAGATGAAATGGAGAGCAGATGGAAAGTTTGCATTACTGCGCTGCTTCACATTTATCGAGTCGGAACATTTGGCCATTTGGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097861

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064373 True 931 lncRNA 0.47 3 46294361 46310011

Neighbor

gene id symbol gene type direction distance location
XLOC_033121 BX005101.1 coding downstream 42421 46168017 ~ 46251940 (-)
XLOC_033122 BX005101.2 coding downstream 66129 46228117 ~ 46228232 (-)
XLOC_033120 ca16b coding downstream 131776 45951893 ~ 46162585 (-)
XLOC_033119 tardbp coding downstream 345240 45937777 ~ 45949121 (-)
XLOC_033118 NA coding downstream 365186 45923942 ~ 45929175 (-)
XLOC_033124 camk1a coding upstream 43899 46353910 ~ 46403475 (-)
XLOC_033125 rdh20 coding upstream 148405 46458416 ~ 46474483 (-)
XLOC_033126 kcnb1 coding upstream 197598 46507609 ~ 46565466 (-)
XLOC_033127 ptgis coding upstream 258108 46568119 ~ 46589726 (-)
XLOC_033128 tarbp2 coding upstream 415529 46725540 ~ 46735380 (-)
XLOC_033111 NA non-coding downstream 2291819 43979711 ~ 44002542 (-)
XLOC_033106 BX927362.1 non-coding downstream 2945275 43346929 ~ 43349086 (-)
XLOC_033135 CABZ01055240.1 non-coding upstream 846291 47156302 ~ 47156416 (-)
XLOC_033138 AL929512.1 non-coding upstream 1292588 47602599 ~ 47602715 (-)
XLOC_033141 NA non-coding upstream 1669294 47979305 ~ 48061659 (-)
XLOC_033145 CU469362.1 non-coding upstream 2070234 48380245 ~ 48381223 (-)
XLOC_033148 CU137649.1 non-coding upstream 2302023 48612034 ~ 48612150 (-)

Expression


Co-expression Network