G1411906


Basic Information

Item Value
gene id G1411906
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 78168477 ~ 78172534 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1613458
CTTCACCCGATAACTTCTCATTGCACTTTGTTCAACTCCTGACCTGCAACTctccacaaccacacagctactgatcactactgatcacaaccacacagctactgatcactactgagcacaaccacacaactactgatcactactgagcacaactactgatcactactgatcactactgagcacaaccacacaactactgatcactactgagcacaaccacacagctactgatcactactgagcacaaccacacagctactgatcactactgagcacaaccacacaactactgagcacaaccacacaactactgatcactactgatcactactgagcacaaccacacaactactgatcactactgagcacaaccacacagctactgatcactactggcacaaccacacagctactgaccactactgagcacaaccacacaactattgatcactactgagcacaaccacacaactactgagcacaaccacacaactactgatcactactgagcacaaccacacaactactgatcactactgagcacaaccacacagctactgatcactactggcacaaccacacagctactgaccactactgagcacaaccacacaactattgataactactgagcacaaccacacaactactgatcacaaccacacaactactgatcactactgatcactactgatcactactgagcacaaccacacaactactgatcactactgagcacaaccacacaactattgatcactactgagcacaaccacacagctactgatcactactgagcacaaccacacagctactgagcacaaccacacagctactgaccactactgagcacaaccacacaactactgatcacaaccacacagctactgatcactactgagcacaaccacacagctactgagcacaaccacacagctactgagcacaaccacacagctactgagcacaaccacacagctactgaGCACAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1613458 True 993 lncRNA 0.47 2 78168477 78172534

Neighbor

gene id symbol gene type direction distance location
LOC110512774 LOC106566310 coding downstream 31053 78104580 ~ 78137424 (-)
dnase1l1 LOC106566338 coding downstream 72097 78071619 ~ 78096380 (-)
LOC118939482 NA coding downstream 138533 78028207 ~ 78029944 (-)
flna LOC100380643 coding downstream 143498 77955599 ~ 78024979 (-)
ikbkg LOC106572992 coding downstream 585819 77493860 ~ 77582658 (-)
LOC110492727 NA coding upstream 29351 78201885 ~ 78203768 (-)
LOC110492720 LOC106573003 coding upstream 33605 78206139 ~ 78314948 (-)
LOC110492722 LOC106566331 coding upstream 151543 78324077 ~ 78381586 (-)
ccdc115 ccdc115 coding upstream 231636 78404170 ~ 78414670 (-)
trnae-uuc-7 NA coding upstream 246284 78418818 ~ 78418889 (-)
G1411896 NA non-coding downstream 20695 78147319 ~ 78147782 (-)
G1411876 NA non-coding downstream 48272 78116746 ~ 78120205 (-)
G1411867 NA non-coding downstream 100635 78067568 ~ 78067842 (-)
G1411845 rl10 non-coding downstream 100967 78056967 ~ 78067510 (-)
G1411850 LOC106592737 non-coding downstream 103194 78064518 ~ 78065283 (-)
G1411909 NA non-coding upstream 6271 78178805 ~ 78179268 (-)
G1411857 NA non-coding upstream 22330 78194864 ~ 78195637 (-)
G1412102 NA non-coding upstream 73628 78246162 ~ 78247398 (-)
G1412110 NA non-coding upstream 91448 78263982 ~ 78264405 (-)
G1412115 NA non-coding upstream 100921 78273455 ~ 78274077 (-)
G1411862 NA other downstream 115339 78050266 ~ 78053138 (-)
G1411366 NA other downstream 817252 77349553 ~ 77351225 (-)
G1411281 NA other downstream 1002654 77165458 ~ 77165823 (-)
G1410911 NA other downstream 1196358 76961470 ~ 76972119 (-)
G1412091 NA other upstream 143783 78316317 ~ 78318998 (-)
G1412203 LOC100136012 other upstream 331757 78504291 ~ 78511632 (-)

Expression


Co-expression Network