G1411857


Basic Information

Item Value
gene id G1411857
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 78194864 ~ 78195637 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1613404
GTGTTGTGGCGCGCAAGTTAGACTTTTGTTTGAATTACTTTTAATTCCGAGTGCGGAGTCCTAACTGGGTCCTAACCGGGTGAATGGGTGTGACACTTTTGGACGTCAAACAGTCGAAAAGATTTTAGAAGCAACAGCTGTGCTGGAATGTGAACAGTTGTGATGGTATGGAGCGGGAGGATGAGGGTCAAAGACCGGAATGGTCGGTAGTGTaaagacaggaagaagagagatcctGATACAGAAAGCAGTGGAGCATCTCCTAAAAAAACGCTTACAGAGGGCCAAGGTAGAAAGCAGGAGTAGTGATGTGTTGGAGTGGAAAGTGGTGATAGTGTTTGAGACCGCAGGGCCTCATTTACACCCTATCCGACTAACCAATGCTGTAGAGAAAGAGATACAGTAGGTGAAGTCAAATTAGCCCGGTTCATTGGAAATGGTAGATTGTTAATACTGTATTTTGTGGTAGCCAGGCTCAGCAAAGGTATATTCTGAAAATGGAAAAGTTTAATGGGAAGAATTTAAAAAGCCATGTCCCTGGTGATTTTGCTAGGTTGAAGGGAGGCAGAGTGATTTGAGGCCAAACGTTTGATCAGTCGGAAAGAGGGTAAAAGTAGTGAAAGCCTATCAGTGCTGCTGAGGTTTGAGAAGGTTTTGCTTGGAAAAGTACAGATAGGATTCCTTAGTTTCAATGTTAGATCATTTGTCCCATATGCACTGCAGTGTTTTCGATGCCATAGAATGGGACATGTAGCTGCTCAGTGTAAAGAAAAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC109086965

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1613404 True 774 lncRNA 0.44 1 78194864 78195637

Neighbor

gene id symbol gene type direction distance location
ndnl2 LOC106593143 coding downstream 1197 78167965 ~ 78193667 (-)
LOC110512774 LOC106566310 coding downstream 57440 78104580 ~ 78137424 (-)
dnase1l1 LOC106566338 coding downstream 98484 78071619 ~ 78096380 (-)
LOC118939482 NA coding downstream 164920 78028207 ~ 78029944 (-)
flna LOC100380643 coding downstream 169885 77955599 ~ 78024979 (-)
LOC110492727 NA coding upstream 6248 78201885 ~ 78203768 (-)
LOC110492720 LOC106573003 coding upstream 10502 78206139 ~ 78314948 (-)
LOC110492722 LOC106566331 coding upstream 128440 78324077 ~ 78381586 (-)
ccdc115 ccdc115 coding upstream 208533 78404170 ~ 78414670 (-)
trnae-uuc-7 NA coding upstream 223181 78418818 ~ 78418889 (-)
G1411909 NA non-coding downstream 15596 78178805 ~ 78179268 (-)
G1411906 NA non-coding downstream 22330 78168477 ~ 78172534 (-)
G1411896 NA non-coding downstream 47082 78147319 ~ 78147782 (-)
G1411876 NA non-coding downstream 74659 78116746 ~ 78120205 (-)
G1411867 NA non-coding downstream 127022 78067568 ~ 78067842 (-)
G1412102 NA non-coding upstream 50525 78246162 ~ 78247398 (-)
G1412110 NA non-coding upstream 68345 78263982 ~ 78264405 (-)
G1412115 NA non-coding upstream 77818 78273455 ~ 78274077 (-)
G1412145 NA non-coding upstream 161766 78357403 ~ 78361301 (-)
G1412146 NA non-coding upstream 162863 78358500 ~ 78358901 (-)
G1411845 rl10 other downstream 127354 78056967 ~ 78067510 (-)
G1411862 NA other downstream 141726 78050266 ~ 78053138 (-)
G1411366 NA other downstream 843639 77349553 ~ 77351225 (-)
G1411281 NA other downstream 1029041 77165458 ~ 77165823 (-)
G1410911 NA other downstream 1222745 76961470 ~ 76972119 (-)
G1412091 NA other upstream 120680 78316317 ~ 78318998 (-)
G1412203 LOC100136012 other upstream 308654 78504291 ~ 78511632 (-)

Expression


Co-expression Network