G1412171


Basic Information

Item Value
gene id G1412171
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 78490128 ~ 78498774 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1613810
TTCTATTTTTAGATACTAGTAGTGCTACGCTCTCTTTCATAAGCCCCTCCTACATGACTTCTGACCTGGCTCCCCAttggtctcctcttcctcctctatggctggctcttcttcttcctctaggACACATAAAGTGAGAGAGTGATAGACAGGCAGAAAAGCCTATCTCGTCCCCTTCTCCATAAGGTGTGCACTTGTTTACTTCAAGACATTGGATTGGTGTAAAGTTATGGCGGAAAATACGTCTTCACCAATCCAAAGCTTTTAAATCCTTGAGTAGGAGTGAACGAGTGCACACTTGTAGGGAGAATGGGATAAGAAGAGCATCAGAATCAGTAGAAAAGTAGAACTGATCTCATTTGAAACCATATTGTCCATACCCCTTTCCTGCAGTTGAATGACCAGAtcggcctcatgggtggaatgttaataatattaataatttcATAATTATCTGAAATTCCGGTGTTtaatgtcaaacggttttgttgtatttcagtcttctgtgatgtatatcaaGTGTAATACTGGGATGCAAACTCCAAATTGATTATATTTAAACTCTATGTCTGACATGGTATggatgtcttctttttttaagctcaaaaccatgtgtgtgaggtgtatccTTTCTTTCAAAGAAGATGTGTTTAAGAGAACCAAGAAACCCCCTGTGTGCTCCTGATTGAGCCCACTGCAACCAACATTTACAAATAGctctaccatgacctgttctgTCAAGTTCTATCATTTTCGACAAATTTCAGTTCATGtgacaaaacaataaatgttttttttggtaAAGAATCACAACCTTAACCTTGCATTACATCTtgcattcaaaatggattaaacagaccctctcacccatctacacacaacaccccataatgacaaagtgaaaatatgttttttgcaTTTTTTTGAAAATGCCatagagtcaatactttgtagaaggacctttggcagcgattacagcagtgaatctttctgggtaagtctttaaaaGCTTGCTAcaactggattgtgcaacatttgccaaaTATTCTCTGTCAAATTCAAGATGGCGCCGACGGAGATGGTCGCCTCActtcgagtccttaggaaactgcagtatttttattttttattttttatttcttacattgtatTGTTACCcgaggaaatcttaagtcttgttacatacagtcgggaagaactattggatataagagtgacgtcaacttaccaacattacgaccaggtatatgactttcccgaagctgATCTTTTGTTCGGACCACCCCCCAGGAcattggatctaatcccagaacCCAAAAGAACGTTGCCGCAGAAGAGGTAGACAAAGCTGCCTCTGGTCAGACTTTCGAAGGCGTGCACACCTCATGCTTCAGAGCATATAATTCGCCAATGTCCAGTGTCTAGTCAACAAGGTGGATGAAATTAGGGCAAGGGTTACATCAGAGAATGTAAaattctctgtttcacagaaacatggctctctcgtgatatgttgtcggaatcggtACAGCCACCGGGTTTCTTCATGCGTCGCGAAACAAACATCTCTATGGTAAGAAGAAGagcgggggtgtatgcttcatgattaacgactcatggtgtaatcattaCAACATACAGGAAAtcaagtcattttgttcacctgacatagaattccttacaatcaaatgccgaccacattatctcccaagagaattctcttcgattattaTCACAGCCAGGTACGGGGCGGCAgttagcctagaggttagagcgttggactagtagccgaaaggttgcaagatcgaatccctgagatgaatccctgagctgttgtTTTGCagctgaaaaaggcagttaacccactgttcctaggccgtcattgacaatGAGCATTTGTTCTGAACTACCTTGACTagttaaaaaagaaaaaaatgtccctcaaggaacttcactggactatgcaaactggaatccatatatgcTGAGACTGCATTAACTGTAGCTGGggaattttaacaaagcaaatttgagagcaaggctacctaaattctaccaacacattgactgCAGTACCAGCGCTGGCAATACACTGGACCACtactactctaacttccgcgatgccctccctttggcaaatccgaccacgactcCATCTCAAATCAACTTGTATAAGTCACATGCGCAAAATAAAACAgtgaccttacaatgaaatgcttacttagaggaccgagcatgccccaacaatgcagttccaAAAAATACAGATCAGAATAAGAGATCAAAGTAAcgagtaattaaagagcagcagtgaaataacaatactatatacagggggtaccgatacagagtcaacgtgagggggcaccggttatttgagatagtatgtaaatgtaggtagagttattaaagtgactttgcatagatgacaacagagagtagcagtggtgtaaagagagggtgagggggggacacggcaaatagtctgggtagccatttgactagatgatcaggagtcttatggcttgggggtagaagctgtttagaagcttcttggacctagacttggcgctccggtaccgcttgttgtgtggtagcagagagaacactctatgactagggtggctggagtgttTGATAATTTTtacggccttcctctgacaatgcctggtatagaggtcctggatggcaggaggcttggccccggtgatgtaccgggccatttgcactaccctctgtagtgccttgcggtcggaggccaagcagttgccataccaggcagccaTACCAGGCAGCAACcagtcaggattctctcgatggtgcaactgtagaatcttttgaggatctgaggacacatgccaaatattttcagtctcctgagggagaacaGGTTTtctcatgccctcttcatgactgtcttggtgtgcttgcaccatgttagtttgttggtgatgtggacaccaaggtactttaagctctcaacctgctccactgaaGCCCCGTCGATGataatgggggtgtgctcggtcctctttttcctgtagtccacaatcatctcctttatcttgttcacgttgagggagaggttgttgtcctggcaccacaaggccaggtcactgacctcctccctataagctgtctcgtcattgtcggtgatcaggcctaccaccgttgtgtcatcggcaatcgcagtacacgtcctggtaatccgtctggccctgcgaccttgtgaatgttgatctttttaaaggtcttactcacatcggctgtggagagcgtgatcacacggtcttccggaacagctgatgctctcatgcttgtttcagtgttatttgcctcgaagcgagcatagaagtagtttggctcgtctggtaggctcgtgtcactgggcagctctccgctgtgcttccctttgtaatctgtaatggtttacaagccctgccacatccaacgagcatcagagccagtgtagtgcgattcaatcttagtcctgtattgatgctttgtctgtttgatggttcattggaGGGCATTGCAGGACTTCTTATAAGCTTCAGGTTTACagttccgctccttgaaagcagcagttctagcctttagctcagtgcggatgctgcctgtaatccatggcttctggttggggtatgtacgtacggtcactgtggggacgacgtcatcgatgcacttattgatgaagccaatgactgatgtagtgtactcttacatattccagtctgtgctagcaaaacagtcctgtagcttagcatctgcttcctctgaacacttttttattgatctagtcactggtgctttctTCTTAaatgtttgcttgtaagcaggaatcaggatagaattacggtcagatttgccaaatggagggcaagggagagctttgtatgcgtccgtgtgtgtggagtataggtggtccagagttatttttcctctggttgcacatttaacatgctgatagaaatttggtaaaacggatttaagtttccctgtattaaactccccggctactaggagcgccgcctctgggtgagcgttttcttgtttgcttatggcggaatacagctcattcaatgctgtcttagtgccagcctctgactgtggtggtatgtaaaacaGCTACAAAGAGTACAAattaaaactctcttggtaggtagtgtggtctacagcttatcatgagatactctacctcaggcaatcaatagcttgagacttccttagaaatcgtgcaccagctgttgtttacaaaaatacaaagaccgccgccccttgtcttaccagaggccactgttctatcctgccgatacatcATATAACcaaccagctgtatgttgatgttgtcgtcattcagccacgactccgtgaagcataagatgttacagtttttaatgtcccgttggtattTTAATCTTCCGTGTAACTTGTCaattattgtccaaagattgcacgtttgctagcagaatggagggaaTTGGGGGTTAAtttgatcgcctacgaattctcagaaggcagcccgacctgCGGCCACTCTTTCTCAGTCTCCTCTTCATGCAGATCACGGGGATCAGAGAAGCAGTGTATCCTTCGCGTCGGGCTTGTCAGAGTCGTCAGAGTCGTGAAGGAAAAagaggattctgctagtccgtggtgagtaatcacagtcctgatgtcttGAAGCTATTTTCGGTCTTAAAAGACGGTAGCgggaacattatgtacaaaataagtaaaaaaacaagttacaaacaatgcaaataaaCAAATGAAAAACACAATCGGctgggggcacgtaaaacgtctACCATCTAATTCCGGCTCCATTTTACAcatcttgctcctaccgtcctataggcagaaactcaaacaggatgtacctgtgaCTAgaactattcaatgctggtctgaccaattggataATACATTGCCGCTGATGCAGCCCGCTTCCAAGGACTGCGGGCTGCCCCTCTCCTTCTTCGTGGCCGACGtgaacgtgttaaccctcgtaaggctgctggcccagacggcatccctaaccCCGTCCACAGAGCAtgctcagaccagctggctggtgtatttacggacatattcaagtCTGCTGTCTAAATAACTAAAAGACTTCTCagctttttattttcaatacatttttaaagtattgagtgtagatcagtgacaaaaCATCTACGTTTAGGGGgactgaatagtttctgaaggcactgtatttccaatAACCACagatgtttgaagctggtgtacaaaacagaAAGTTCACAGACGCCAGAGCCAAATTTAAGGGCAGGAAGCATAAAAAGAGAGCTCATGGAACTGATAGACTTCAATGAGaacctaaaaaaatatatatatgtgagagagctggagagacagacatgACAGAAGGAGGTGGCtgagctggagagacagacatgACAGTGGTGGCTGAGTTGAAGAGTCAGCACCGACTGATAATTATTAGTTGACAGAAGCTCCACCCCAGTACATCTTCGagcattcatgtgtgtgtgtgttgggagtggggggggggggggggttaaggtaGCAACATAGataagcagcagcaggagcactaccttcttcctctccctcatcctcctcatcctcttctccttcctccttctcctctcaagAGTTATGTTAGTGTATCAGCTAAACAGCAGTACAGAAGCCAGTGCCACAcacacagttgcaaatgagaacgtgttctcaactaaactacctggttaaataaaataaataaataaaacacacacacacacaaaaacagtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtatatgtgtgtgtatatatgtgtttgtgtgtgtttatatgtgtttgtgtgtgtttatatgtgtttgtgtgtgtgtgtgtgtatctgcgtttgtgtctatctgtctgtgtgtgtgtgttttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtgcgtgcgtgttggaTATCAGAGCGTCATCAATTTatcagcactacgaccaggaatatgactttcccgaagtggatcctTTGTTCAAACCATGCAATTCGAATTAATCAGCTGTGTTCGCTAGGAGAAAAGTGTAACACCAACCAGGCCctcaaggactggagttgcctACCCCTGGTCTAGGCCCACCCCTGGTCTAGACCCACCCCTGGTCTAGGGTTAGGGTCTAGGCCCACCCTGGTCTAGGCCCACCCctggtctagggttagggttagggttagggtctagGCCCACCCTGGTCTAGGCCCACCTCTGGTCTAGGGTTAGGGTCTAGGCCCACCCCTGTTCTAGGCTCACCCCTGgtctagaccaactccaatttgtataccgccccaacaggtcaaACAGGTATACAGACAATGCAATCATCATCACACTgcgcactgccctatcccatttggacaagaggaatacctatgtaagaatgctgttccttgactacagctcagcattcaaaaccatagtaccctccaagctcatccttaagcttgagacccttggtctcaacccctccctgtgcgactgggtcctggacttcctgacgggccacccccaggtgatgaagttaggaaacaacatctccactttactgattctcaacactggggccccacaagggtgcgtgctcagccctctcctgtactccctgttcacccatggctgCGTGCCATGCAcaccttcaactcaatcatcaagtttgcagacggcacaacagtagtaggcttgatcaccaacaacgacgagacagacAATAtgaaggaggtgagggcactcagagtgtggtgtcaggaaaataacctctcactcaacgtcaacaaaacaaaggagataatcATGGAAACAGCAGTGGGTGCTGTGGAacgtttcaagttcctcggcgtacaattcacgaacaaactgaaatggtccacacagacagcgtggtgaagaaggcgcagcagcgcctcccCATACTCAGGAGgatgaagaaatgtggcttgtcacctaataccctcacaaacttctacagatgcacatttTAGAGCGTCTTgccggctgtatcaccgcctggtatggaaactgcaccgcccacaaccgctgggctctccagagggtagtgcggtctgcacaacgcatcactggggggcaaactatctgccctccgggacacctacagcacccgatgtcacaggaaggccaaaaagatcatcccctgagccactgcctgttcacctcatcaccatccagaaggcgaggtcagtacaggtgcatcaaagctgagaccgagagactgaaaaaatggcttctatctcaaggccatcagattgttaaacagccaccacaaaGGCAGAGAGGCTGCtgactacatacagacttgagGTCATGGGCCACTCTAACAAAATGGATCACTCGTCACTTTatcaatgccactttaataatgatgtttacatatttgcattactcatctcatatgtatgtactgtattttaccCCATCTATTGCATCTCGTCTATGCCGGTCAGTCATGgcccatccatatatttatatgtacatatttttttccatccctttacttagatgtgtgtgtattaggaaATTGTTATGGAactgttagattacatgttagatattgctgcattgtcgaactagaagcacaagcatttcgctgcagtcacattatcatctgctaaccatgtggatgtgaccaataacattacaatttgatatgatttgatttggcacagacacacatacacacacacacagacatacacacacacagacacacacgcatacacacacacatacatacacacacacagacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacatacacacacacacagacatacacacacacacatacacacacacacacacagacacacacacacacatacacacacacagacacacacacacacatacacatacacatacacacacacagacacacacacacaaatcaaaatcaaatcaaatgtatttatatagcccttcgtacatcagctgatatctcatagtgctatacagaaacccagcctaaaaccccaaacagcaagcaatacaggtgtagaagcacggtggctaggaaaaactccctagaaagggcaagagctaggaagaaacctagagaagaaccaggctatgtggggtggccagtcctcttctggctgtgtcggacacacacacacacacacacacacacaaacacacacaaacacatgcaagcacacacacacacataaaacacgtacaaacacacacacacacacacagaacttaCCATTCTGCTCCCTGTGGATGAATAAGAAATTATAATCACAGAAAACAACAGGCATTAGAAACAGAAATTCAACAAAATATATAAGTAAGTGAAATGTGAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1613810 True 8514 lncRNA 0.45 2 78490128 78498774
Loading

Neighbor

gene id symbol gene type direction distance location
fkbpl LOC106591935 coding downstream 35667 78441631 ~ 78454461 (-)
trnan-guu-13 NA coding downstream 68077 78421978 ~ 78422051 (-)
trnae-uuc-7 NA coding downstream 71239 78418818 ~ 78418889 (-)
ccdc115 ccdc115 coding downstream 75458 78404170 ~ 78414670 (-)
LOC110492722 LOC106566331 coding downstream 108542 78324077 ~ 78381586 (-)
G1412202 NA non-coding downstream 3167 78486761 ~ 78486961 (-)
G1412200 NA non-coding downstream 6445 78483477 ~ 78483683 (-)
G1412193 NA non-coding downstream 33241 78456444 ~ 78456887 (-)
G1412169 NA non-coding downstream 36860 78452343 ~ 78453268 (-)
G1412203 LOC100136012 non-coding upstream 10199 78504291 ~ 78511632 (-)
G1412091 NA other downstream 171130 78316317 ~ 78318998 (-)
G1411845 rl10 other downstream 422618 78056967 ~ 78067510 (-)
G1411862 NA other downstream 436990 78050266 ~ 78053138 (-)
G1411366 NA other downstream 1138903 77349553 ~ 77351225 (-)
G1411281 NA other downstream 1324305 77165458 ~ 77165823 (-)

Expression

G1412171 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 150.
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G1412171 Expression in each Bioproject

Bar chart with 20 bars.
G1412171 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 400.
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Co-expression Network