Fish Transcriptome and Expression Database

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economic fish

G1412089

Basic Information

Item	Value
gene id	G1412089
gene name	NA
gene type	non-coding
species	rainbow trout (Oncorhynchus mykiss)
category of species	economic fish

Chromosome Information

Item	Value
chromosome id	NC_048580.1
NCBI id	CM023234.2
chromosome length	78541548
location	78508042 ~ 78508378 (+)
genome version	USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1613701
CACAGGAAGAGTATGGAGAAGGatatttagttgttgttgttattgtttttatttctgCCGGACATCCACAGGAAGAGTATGGAGAaggatatgttgttgttgttattgtttttatttctgCAGGACATCCACAGGAAGAGTATGGAGAAGGatatttttttgttgttgttgttattgtttttatttctgCAGAACATCCACAGGAAGTGTATGG

Function

GO: NA

KEGG:

id	description

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TU1613701	True	214	lncRNA	0.36	2	78508042	78508378

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Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
hsd17b10	hsd17b10	coding	upstream	340899	78148707 ~ 78167143 (+)
LOC110532872	rl10	coding	upstream	440625	78059245 ~ 78067417 (+)
LOC118939606	NA	coding	upstream	442711	78065199 ~ 78065331 (+)
LOC118939607	NA	coding	upstream	445255	78062655 ~ 78062787 (+)
haus7	haus7	coding	upstream	565213	77928168 ~ 77942829 (+)
G1412074	NA	non-coding	upstream	16893	78490791 ~ 78491149 (+)
G1412068	NA	non-coding	upstream	26701	78481122 ~ 78481341 (+)
G1412063	NA	non-coding	upstream	49782	78457975 ~ 78458260 (+)
G1412062	NA	non-coding	upstream	50166	78457476 ~ 78457876 (+)
G1412053	NA	non-coding	upstream	74235	78433497 ~ 78433807 (+)
G1412213	NA	non-coding	downstream	8712	78517090 ~ 78517330 (+)
G1411988	ccdc115	other	upstream	94496	78404191 ~ 78413546 (+)
G1411664	NA	other	upstream	384080	78123310 ~ 78123962 (+)
G1411161	NA	other	upstream	1013701	77492694 ~ 77494341 (+)
LOC110515522	LOC106566305	other	upstream	1060300	77347958 ~ 77447742 (+)
G1410994	NA	other	upstream	1445948	77061502 ~ 77062094 (+)

Expression

Co-expression Network