G1412213



Basic Information


Item Value
gene id G1412213
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 78517090 ~ 78517330 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1613861
tgcaaaatcggcagtgtatcaaatacttgttctccccactgtatgtataaaaaaaatactacTACCGGTCAAAAGATAAAACAACAGTTTCAAATAATATGACCAGATCACAGTTACTACTCTGGAACCCTCCACAAAGAGAACTTATTGTACTCTTATGGCCATCGgaggagagactcagagagaatgtctGCCCTTAGTCCAAGGCTATGTCATTTCTTTCTTCTCATTGGTTCAAATG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1613861 True 241 lncRNA 0.39 1 78517090 78517330
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110492717 LOC106593306 coding upstream 6054 78488784 ~ 78511036 (+)
hsd17b10 hsd17b10 coding upstream 349947 78148707 ~ 78167143 (+)
LOC110532872 rl10 coding upstream 449673 78059245 ~ 78067417 (+)
LOC118939606 NA coding upstream 451759 78065199 ~ 78065331 (+)
LOC118939607 NA coding upstream 454303 78062655 ~ 78062787 (+)
G1412089 NA non-coding upstream 8712 78508042 ~ 78508378 (+)
G1412074 NA non-coding upstream 25941 78490791 ~ 78491149 (+)
G1412068 NA non-coding upstream 35749 78481122 ~ 78481341 (+)
G1412063 NA non-coding upstream 58830 78457975 ~ 78458260 (+)
G1412062 NA non-coding upstream 59214 78457476 ~ 78457876 (+)
G1411988 ccdc115 other upstream 103544 78404191 ~ 78413546 (+)
G1411664 NA other upstream 393128 78123310 ~ 78123962 (+)
G1411161 NA other upstream 1022749 77492694 ~ 77494341 (+)
LOC110515522 LOC106566305 other upstream 1069348 77347958 ~ 77447742 (+)
G1410994 NA other upstream 1454996 77061502 ~ 77062094 (+)

Expression


G1412213 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
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G1412213 Expression in each Bioproject

Bar chart with 2 bars.
G1412213 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 25.
End of interactive chart.

Co-expression Network