XLOC_033136 (im:7151449)


Basic Information

Item Value
gene id XLOC_033136
gene name im:7151449
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 47484084 ~ 47506351 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064392
ATGACAAGTGTGAGGACTTTGTTACTACTTTTCCTGTCATCTTTGCTGGTAACTATGGGGAAAGCGAAATGTTTGTTCCCTGTTTTGAATGGCAACCATGTCTTATCCTTGGAGTCCAGACTGAAAAACGAATTCCCCGATGGTTCAACCGCTGTGGCTGAGTGTGCAAGAGGATACGAGGCAAAGGATGGATCACCTTTAATCACTTGCCAGAATGGAAAATGGAGTAAAGTAGAATTAAAATGCGAAAAGATGGATTGTGGACCGCCAGAACCACAATCATcacatatgacatatttaatcAACAATGGAACATTGTTTGGAGCCTATGTAAAAGCTTTATGTGACACTGGATATGACCTGGAAGGATCAAGCTACAGACAATGTCTTGTAACAGGCTGGAACGGACGTGCTACATGCACATTGATAACATGTGATAATCCAACTCCTCCTGAACATGGCAATGTGATGTTTCGTAGTCCTGTTCTATATAATGATGTTATCAAATATTCATGCCAAGAAAACTACACCCTTGTTGGAAACAGATCCCTTACCTGTGGGGATGATTGGGATTATAATTTTCCACCTCCAAAATGTGAAGCTATTGAATGTGGAGTTCCTACTATTAAATTTGGTAACCAGACTGAAGGAAATCCTCCATACCTACATAAAAGCCAAGCCACTTTTGAATGCTTGCCAGGTTACAGGATGAATGGTTCGGCCACATCAGTGTGTGAGGAGAGAGGCTGGTCTGCACTGCCTGAATGTGTTAAAGCTATCCTACTACAGCCAGAAGAAACCACCACAGTTGTTGCATCAACAGTCACCACAGACATTGCAACAACAAACGCAGTATTCTGTAaagaagaagaagaagaagaagaggaggaggaggagcactTCATTACTGTCTCGCAGAATAATTCGGTTTGGATAATAGTTgtagcagtgttggcaacattGGCCATTGTGTGCATTTTATGTGGTTTGCTGCATTATAACTATAAACATAAAGGTTCTTACAATACTGGCGAAGATCAGAGGACAAAAGACGGGTTATTGCTTTATCAGACTTTATAA

Function

symbol description
im:7151449 Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in cardiovascular system and myotome. Human ortholog(s) of this gene implicated in several diseases, including atypical hemolytic-uremic syndrome; hemolytic-uremic syndrome; meningococcal meningitis; multiple sclerosis; and pre-eclampsia. Orthologous to human CD46 (CD46 molecule).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041111-283 Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in cardiovascular system and myotome. Human ortholog(s) of this gene implicated in several diseases, including atypical hemolytic-uremic syndrome; hemolytic-uremic syndrome; meningococcal meningitis; multiple sclerosis; and pre-eclampsia. Orthologous to human CD46 (CD46 molecule).

Ensembl:

ensembl_id ENSDARG00000086724

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064392 True 1080 mRNA 0.41 11 47484084 47506351

Neighbor

gene id symbol gene type direction distance location
XLOC_033134 grm4 coding downstream 237136 46981486 ~ 47246948 (-)
XLOC_033135 CABZ01055240.1 coding downstream 327668 47156302 ~ 47156416 (-)
XLOC_033133 igfn1.1 coding downstream 542839 46878889 ~ 46941245 (-)
XLOC_033132 igfn1.3 coding downstream 608774 46843592 ~ 46875310 (-)
XLOC_033131 igfn1.4 coding downstream 694042 46771654 ~ 46790042 (-)
XLOC_033137 magi3b coding upstream 23530 47529881 ~ 47796989 (-)
XLOC_033138 AL929512.1 coding upstream 96248 47602599 ~ 47602715 (-)
XLOC_033139 lrig2 coding upstream 303404 47809755 ~ 47840465 (-)
XLOC_033140 RAP1GAP coding upstream 363046 47869397 ~ 47953829 (-)
XLOC_033141 NA coding upstream 472954 47979305 ~ 48061659 (-)
XLOC_033123 CU041346.1 non-coding downstream 1174073 46294361 ~ 46310011 (-)
XLOC_033121 BX005101.1 non-coding downstream 1232144 46168017 ~ 46251940 (-)
XLOC_033122 BX005101.2 non-coding downstream 1255852 46228117 ~ 46228232 (-)
XLOC_033118 NA non-coding downstream 1554909 45923942 ~ 45929175 (-)
XLOC_033145 CU469362.1 non-coding upstream 873894 48380245 ~ 48381223 (-)
XLOC_033148 CU137649.1 non-coding upstream 1105683 48612034 ~ 48612150 (-)
XLOC_033149 NA non-coding upstream 1408517 48914868 ~ 48949515 (-)

Expression


Co-expression Network