XLOC_033137 (magi3b)


Basic Information

Item Value
gene id XLOC_033137
gene name magi3b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 47529881 ~ 47796989 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064393
TTAACCTCCACCTGAGAGCCATCCAGTCACAGGCCGCACTGGCTGTTCACGGAGAGCGCGCGCGCGTTACACACTCGCTTCATTTGACAAACACAAGCTGAGCGCAACAGTAGCCGCCGTGCCTGAAGATCTGAGAGAGCAGCCGCCGCAAATGACAGCATCACCGCGACCATTTGAGGCGATAAAGACATGCTCGACAGGTTTATTTCTCTAGCAGGCTATTCGTCAGTGGTTAATAATGTGTGAAGGCTCAGCTTCAAGCCAGGAATGAAGACGCGCCAGACGCATCCACTCACTGACTGGGCATCGCGTTTCGAAAACGAACCTGAGCTTCGACCGACTGGACAGACCCGACAACAACCGAATACATCCGAGACTGGCGTTATATTCTCCGAGGCACTGTTTTGCTGATAATTCGCACATTTTAATTTCGCCCTAATGACGGACACGTTGTCAGTCTTGTGCGCTTGATGCCGTGCATGCAAAACCTGAGTGAACTTAACAGGTAAACACAGTTTTACTTCGTTCTTGTGCttattgttgttttacttttGACGTTATTTTGCATGATGTGGCTATTTTGTGCATTTGTTTCGTCGTTTGATTGAATAttttcatgaactaataatgGTGCTAGATGAGGCTTATGGAGAAATCACAGGCTGGATGGCGCTTCGCATCCGCGCGCTGTCATCTCCTCACCGGGTAAAGTGAACGTCTCACCGGGGAGAAAGGCTTCAAAACCTGTTCGCGTAAGACTGCACTGAAACTTTAAGGATTCACGATGTCTAAAACGCTCAAGAGGAAGAAACACTGGTCTACTAAAGTGCAGGAGTGCGCCGTGTCGTGGGGAAGCGTCGGGGAGTTCGGGGATGTTGTGGAGATCCTCGGAGGCGCCGAGCTCGGGGAGTTCCCGTTTCTCGGTCAGATGAACTTGGACGTGCTGGTGTGTCATGTTGGGAGACTACCGTACTACGGGGATGTGTTACTGGAAGTGAACGGGACACCTGTCAGCGGGCTGACGAACCGAGACACGCACGCGGTGATCCGCCACTTTCGGGAGCCGATTCGAATTAAGACCGTCAAACCAGGTAAAGTGCTGAACTCTGATTTGAGGCATTATCTCAGCCTGCAGTTTCAAAAAGGATCAATCGACCACAAACTGCAGCAAGTGATCCGAGACAACCTGTACCTGCGCACCATTCCATGTACCACTCGGCTGCCCAGAGATGGGGAGGTTCCAGGAGTGGACTATAATTTCATCAGCGTGGGGGATTTTCGCATCCTGGAGGAGAGTGGATTACTGTTGGAGAGTGGGACATATGATGGTAATTTTTATGGGACTCCCAAACCTCCTGCTGAGCCCACCTTGGTTCAGCCGGATCTGGTGGATCAGGTTCTGTTTGAGGAGGATTTTGGCCCTGAAGTTCAAAGAAAGCGAACTACATCCGTCAGCAAGATGGACCGTAAGGACAGTGTTGTccctgaggaagaagaggatgAGGAACGACCACAGCTCCCAAACGGCATCCcagAGCGGACGGAGGAGTGGAGGAAAGCAGTGCCCAGTTACACTCAGTCCAGCGGTGCAGGAGGCAGCGGCACACTGGAGATCCGCACCTGGAGCTCTTTACCCAGAGACGACAGCCTGGAGCCCCTGCCCTACAACTGGGAGATGGCCTATACAGAGACCGGCATGGTCTACTTCATTGACCACAACACGAAGTCGACAACATGGTTGGATCCTCGTCTGGTGAAAAAAGCCAAGCCTCCTGAAAAGTGTGAGGATGGAGAGCTTCCATACGGATGGGAGGAGATTGATGACCCGCAGTACGGCACATATTATGTAGATCATATTAACCAGAGAACCCAGTTTGAGAATCCAGTCGTAGAGGCCAAGAGGAAACTGGGTCTGGACACTGCAGTGGCGACTCAAACCCAACAGAGGGCAGCACCTCCTCCAGGTGGAGCGGCTGGTACACCCGGATTCACTCGGGACCCGACTCAGCTGAAGGGGGAGCTCTATCACACGGCTCTCAGGAAGAGCCAGCAGGGCTTCGGCTTCACCATCATTGGAGGAGACCGATCGGATGAGTTCCTGCAGGTGAAGAACGTCCTGTCTGATGGCCCGGCCGCGCAGGACAACAAGATGGCTTCTGGTGATGTTATTGTGGAAATCAACGGCACTCTTGTTTTAGGAAAGACTCATGCAGATGTAGTCCACATGTTCCAGTGCATCCCAATTAACCAATACGTGGACATGGTGCTCTGCCGTGGGTACTCGCTCCCTCCTGATGTGGATGCAGACAGCGAGGACCTTCCACCTCCACCTCCACCTCCCACAGGAGAGATCGTCACAGCCGTGCCCCTCATCAACGGCCAGCCACTGCTTGTCAAAGGGGACGCCCTCCACGGCTCTTCCCAGGAGCTCCACTACGTCACCACAGATGCCAGCGGGCGCCCGGTGGTTGCTGCTCTTCCTGCGAGCAGCGCTGCCAACGACAGACCAGAAACAGGGATGCTGCAGCCGGAGCTGGTGAGCGTGCCAATCGTGAAGGGACCTGGAGGATTCGGCTTCGCTATTGCAGACTGTCCGCTGGGGCAGAAGGTGAAAATGATCCTGGACGAGCAGTGGTGCCGAGGCCTGCTGAAAGGAGATGTGATAAAAGAGATTAACAGGCAGAACGTGCAGACGCTGAGCCATGCGCAGGTAGTGGATATACTGAAGGATCTCCCGGTGGGCAGCGAGGTCAATCTGCTGGTGTTAAGAGGAGgTCAGACATCGCCTGTGAAGAGTTTAAGACCGAGAGGAGGGATGAGTGCCAGCACTGAGACTCTGGACCGCTGCCATGATATGATGGTTCCCCAGGCTTTGACCTATCATTCAAACACACTGCCGTGTAGCTCTCCCAAACAAGACGCTTCCCTTCACTATAGTAAACCCAAAGCCCTGACGGAGAGCATAGTACCTCAATATAAAGAGCTGGATGTGTTCATCAAAAGAGATCAGGAGACGGGCTTTGGTTTTCGTGTGCTTGGAGGAGAAGGTGCAGAACAACCAGTGTACATTGGTGCCATCATCCCCCAAGGGGCGGCTGAAAAGGAAGGCCGCCTGCGGGCTGGAGATGAGCTCATTGGCATCGATGGCATCACCGTTAAGGGTAAATCTCACAAACAAGTCCTGGACCTGATGACAAACGCAGCACGCAACGGACAAGTGCTGCTTTCAGTGCGCAGGAAGGTCATTTTCCGAGATGCCCTGGAGGATGTTGGGAGTGGAGCGTTGACCCTTGTGAATGGATCACCTCGGCTTCCGCGGATTCAGGTGCCAAGCGTCAAGGACCAGGAGTCGTTTGATATCACGCTTCATCGCAGAGATAACGAGGGCTTCGGCTTTGTCATTCTCACCTCTAAGAGTAAACCGCCACCGGGAGTGTGTGTTTCAGTGATTCCTCATAAGATCGGTCGAATAATCGAGGGCAGTCCGACTGACCGATGTGGACTGCTGAACGTGGGTGACCGTATATCCGCTGTGAACAGTCAGTCCATTGTGGAGCTCTCCCACAACGACATTGTTCAGCTCATCAAAGACGCCGGAAACTCAGTCACGCTCACCGTGGTTCCTGAGGACGAGTACAAAGGCCCGCCTTCAGGAGCCAGTTCAGCCAAACAAAGTCCAGCACCACAGCACAAGACCCTCAAATCCACTCAGGACGAGAGGTATAATTTGGATATGGATGAGATCAGGGACGAGCTTACATGGACGGAGTATAAAACGCCAAACAGGCAAGAGTCCAAACAGGGCTGTATTGCAGTTGAGCTGGAGCGTGGTCCTCGTGGTTTCGGCTTCAGTCTGAGAGGAGGAACGGAGTACAACATGGGCCTCTACATCCTGCGTCTGGCTGAGGATGGTCCTGCTTTACAGGACGGCAGGATACACGTAGGAGATCAGGTTGTGGAGATCAATGGCGAACAGACACAAGGCATCAGTCACACTAGAGCCATTGAGCTGATCCAAGCTGGAGGAAACAAAGTGCTGCTGTTACTACGACCACAAGCCCTGCTGCCAGAGAACAGTTGTGTGAGCTCCTCCACCGTGTGTTACTGCCCCCAGGAGCATCATCACTAACAGCCTCTGTTTTCCTCTAGGTCTTTTTTCTTTGGTTCTGCAGGAGATGTTATCCTTCCTGATCCGCCGGGATCCCACACTTCCAACATTCCTCTCAGTTCTCATCCAACATCCACCTCAGTGAAGAAGAGGACGGGCCTGACAGACGGCTCTTTAAATCCCTCTAAAGACAGCAAGAGGGAGAAACACACCAAAACACCAAACACCAGCTCGTCCAGAGTCTCACAGCAGCCGCGGCGCATCAAGAGTCGCTCCGCAGAGAATCTCCTTGATCTCGGAGATACAGAGAAATCCAAAAGCCCATCCAAAGCCAAAGACAAAGCTCACAGCCACAAAGAAAAGCTTCAACAAAGCACTCGAGACTCCCAGAAGAACAGATCATCCCGCCAGCACAGCCGCTCCGTCAGCCCTCAAAAGTCCAGGCGAGAACGTCAGGAAGTGGAAATTGGCGAAACCGAGGAAAGCCACTTGGACCAAAGGAAAAGTGGCACAGATAGGAGGAAAAAACGTGAGTCTGCGGTAAGGAAGCGAAATGAAACCCAAGAGAGAGAATCTGAGAGAAAAGTGAAGAGCAAAGAAGATGAAGAGGTCCAGCGAAAAGGCCAAGCTGAACTTGAAGGCACCCAAAAGAAGAAAAAGCAGAGAAATATAGAGATGCAAAATGGAGACACCCTTATATCCCCAGACAGGaagagcaaacaaacaaaggaTAAGGGATCTTTGAGGGATCAGAGGAAAGAAAACAAGAAGGAAATGATTAGAGACGGGAGCAAAAACAAAAGGAAAGGAAATGAGAGCGAAAACAGTAAAGACGACATTGACAGCACAGATGCGGCTCCGCTCTCCACCAGAGCGAGTCTAGTGTTTGACCACCCAGGACCCTTAAGTGAAGGCCTTTGGAAGGATCCGAGTTATGTTAGAATTCTCACTCGCGAGGAAGTGATGCGAGATGTTTTCGAGTAGATTGATGATGCTTTGGAAGAGAAGGTTGTAAGACCAGAAATATATGCTGGAATGTGAATGCTTCTAGAAAAGACACTGCAGTCGCGTTTGATCAGCTCATCATTAATATCTAGTGTCATTTAGTTTAAATCATTCatcagggctgcatgatattggagaaaaactgacattgcagtaCTTTATTTTTCTCTGAAACGCATTGCGATATTGAGTGTACTTTCACTAGATGGATGAATACCTTTAGTTGGGAAGAATTTGTCATTTTAGGTAGATTGGAATGACTTTGTATTGGGAGAGTACAtctgtttaaaatataaacaaatcaacCACAAGCGTTGATTAATagtaattcaattcatctttatttctatagcacttttacaatgt
>TCONS_00064394
tggtacttaagctgtcactggggtggtaccttttcaaaaggtacacatttgtacttaaagggtccttaTTGGTACGTCAAACGTAAAGTGCTGAACTCTGATTTGAGGCATTATCTCAGCCTGCAGTTTCAAAAAGGATCAATCGACCACAAACTGCAGCAAGTGATCCGAGACAACCTGTACCTGCGCACCATTCCATGTACCACTCGGCTGCCCAGAGATGGGGAGGTTCCAGGAGTGGACTATAATTTCATCAGCGTGGGGGATTTTCGCATCCTGGAGGAGAGTGGATTACTGTTGGAGAGTGGGACATATGATGGTAATTTTTATGGGACTCCCAAACCTCCTGCTGAGCCCACCTTGGTTCAGCCGGATCTGGTGGATCAGGTTCTGTTTGAGGAGGATTTTGGCCCTGAAGTTCAAAGAAAGCGAACTACATCCGTCAGCAAGATGGACCGTAAGGACAGTGTTGTccctgaggaagaagaggatgAGGAACGACCACAGCTCCCAAACGGCATCCcagAGCGGACGGAGGAGTGGAGGAAAGCAGTGCCCAGTTACACTCAGTCCAGCAGCGGCACACTGGAGATCCGCACCTGGAGCTCTTTACCCAGAGACGACAGCCTGGAGCCCCTGCCCTACAACTGGGAGATGGCCTATACAGAGACCGGCATGGTCTACTTCATTGACCACAACACGAAGTCGACAACATGGTTGGATCCTCGTCTGGTGAAAAAAGCCAAGCCTCCTGAAAAGTGTGAGGATGGAGAGCTTCCATACGGATGGGAGGAGATTGATGACCCGCAGTACGGCACATATTATGTAGAGTAA

Function

symbol description
magi3b Acts upstream of or within cilium assembly. Located in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000025974

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064393 False 5479 mRNA 0.51 22 47529881 47796989
TCONS_00064394 True 834 mRNA 0.51 9 47571271 47632398

Neighbor

gene id symbol gene type direction distance location
XLOC_033136 im:7151449 coding downstream 23530 47484084 ~ 47506351 (-)
XLOC_033134 grm4 coding downstream 282933 46981486 ~ 47246948 (-)
XLOC_033135 CABZ01055240.1 coding downstream 373465 47156302 ~ 47156416 (-)
XLOC_033133 igfn1.1 coding downstream 588636 46878889 ~ 46941245 (-)
XLOC_033132 igfn1.3 coding downstream 654571 46843592 ~ 46875310 (-)
XLOC_033139 lrig2 coding upstream 12766 47809755 ~ 47840465 (-)
XLOC_033140 RAP1GAP coding upstream 72408 47869397 ~ 47953829 (-)
XLOC_033141 NA coding upstream 182316 47979305 ~ 48061659 (-)
XLOC_033142 slc2a1b coding upstream 271706 48068695 ~ 48094342 (-)
XLOC_033143 st7l coding upstream 493136 48290125 ~ 48317562 (-)
XLOC_033123 CU041346.1 non-coding downstream 1219870 46294361 ~ 46310011 (-)
XLOC_033121 BX005101.1 non-coding downstream 1277941 46168017 ~ 46251940 (-)
XLOC_033122 BX005101.2 non-coding downstream 1301649 46228117 ~ 46228232 (-)
XLOC_033118 NA non-coding downstream 1600706 45923942 ~ 45929175 (-)
XLOC_033145 CU469362.1 non-coding upstream 583256 48380245 ~ 48381223 (-)
XLOC_033148 CU137649.1 non-coding upstream 815045 48612034 ~ 48612150 (-)
XLOC_033149 NA non-coding upstream 1117879 48914868 ~ 48949515 (-)
XLOC_033152 NA non-coding upstream 1303890 49100879 ~ 49104192 (-)

Expression


Co-expression Network