LOC118940061


Basic Information

Item Value
gene id LOC118940061
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 3608085 ~ 3609985 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118940061
atgtatgcatatACGCTAATagaacacaaacaccagtggagacccacagggaagaaaCCTTaccgctgctctgactgtgggaagagattccCCTCTTCAGCTGGCCTTAAAAGACATCTGAGAATCCACGCAGGAGAGAAACCTAATAGCTGTGAtaaatgtgggaagagttttagtgTTACAAGCAGCCTGAAagcacaccagagaacacacacaggagagaaaccttacagctGTTATCAGTGTGGGAAAAGTTTTACTTCATCTAGCCACCTGaccatacaccagagaacacacacaggagagaagccttatagctgtgatcaatgtgggaagagttttgttacaTCTAGCTGTCTGACCATACaccaaagaacacacacaggagagagaccttaccactgctctaactgtggaaagagttttgttaTCTCAGGAAATTgaacatcacaccagagaacacacacaggggagaagccttatagctgtaatcaatgtgggaagaattTTTCTCACTCAGGCAACCTGATAGCACACCtgagaatacacactggagagaaacctcattgctgctctgactgtgggcaGAGATTCATCTTTTTAGCAGATCTTAAAATACATCAGAGAATCCATACAGGAGAaaaaccttaccactgctctgactgtggaaagagttttgtttcatcaaaacatttaaaatcacaccagagaacacacacaggagataagccttatagctgtgatcaatgtgggaagagttttggaaCATCTAGCAGCCTGAAAACACACCAGAGgggacacacaggagagaaatcttatagctgtgatcaatgtgggaagagttttgttactTCTAGCAGTCTGACTATGCACCagcggacacacacaggagagaaacctcatagctgtagtcaatgtgacatgagatactctgataaaagatctctgattaaacaccagaaaatacatgaagtagttgtttcatgatatcaatgaaat

Function

NR:

description
zinc finger protein OZF-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118940061 True 999 mRNA 0.42 2 3608085 3609985

Neighbor

gene id symbol gene type direction distance location
LOC110487186 LOC106595670 coding upstream 25372 3573552 ~ 3582713 (+)
LOC118940207 LOC106595687 coding upstream 38729 3563394 ~ 3569356 (+)
LOC110506843 LOC106595654 coding upstream 50760 3551904 ~ 3557325 (+)
LOC110506159 LOC106595729 coding upstream 71239 3530474 ~ 3536846 (+)
LOC110506850 LOC106593733 coding upstream 81968 3519620 ~ 3526117 (+)
trnai-uau-4 NA coding downstream 5084 3615069 ~ 3615162 (+)
LOC118940205 LOC106585892 coding downstream 60235 3670220 ~ 3678312 (+)
LOC110487326 LOC106607542 coding downstream 73592 3683577 ~ 3711129 (+)
LOC110513872 LOC106593751 coding downstream 111469 3721454 ~ 3728602 (+)
LOC118940209 LOC106607538 coding downstream 123184 3733169 ~ 3750932 (+)
G1414440 NA non-coding upstream 1255 3605120 ~ 3606830 (+)
G1414431 NA non-coding upstream 5168 3587428 ~ 3602917 (+)
G1414434 NA non-coding upstream 7152 3590393 ~ 3600933 (+)
G1414425 NA non-coding upstream 35515 3572032 ~ 3572570 (+)
G1414459 NA non-coding downstream 35740 3645725 ~ 3646419 (+)
G1414461 NA non-coding downstream 38492 3648477 ~ 3649954 (+)
G1414475 NA non-coding downstream 75315 3685300 ~ 3693680 (+)
LOC118940210 NA non-coding downstream 168513 3778498 ~ 3794005 (+)
G1414519 NA non-coding downstream 187363 3797348 ~ 3800636 (+)
G1414430 NA other upstream 15170 3587244 ~ 3592915 (+)
LOC118940198 LOC106593831 other upstream 250391 3355122 ~ 3359173 (+)
LOC110513329 LOC106595349 other upstream 320127 3279105 ~ 3288531 (+)
LOC118940192 NA other upstream 616446 2988823 ~ 2992650 (+)
G1414190 NA other downstream 280778 3890763 ~ 3893220 (+)
LOC118940211 NA other downstream 505677 4115570 ~ 4119613 (+)
LOC118940222 NA other downstream 876641 4486626 ~ 4489118 (+)
LOC110533195 LOC106591134 other downstream 882181 4489324 ~ 4500670 (+)

Expression


Co-expression Network