XLOC_033168 (BX629346.1)


Basic Information

Item Value
gene id XLOC_033168
gene name BX629346.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 49919936 ~ 49921857 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064442
cacaagACATGATTTTGAATTGCCAAAAGCCCCAGATATGcctgccaaatatctcacggttGTCAGTAGTGGCACTGATGGTCGGTACGGGCCCAGTGACAACATTtagGTTTTTCAGGTTTTGTCACAGACAAAAGTGAGGAGCGGGGTTTGGGGAGTGGGGGAGAGAGGGTGATTGGGGGCCCCCAATAGTatcattggcgattctctcagatcgcatctttgataATACACACTGTGTGATAGTTTTTCACGTGAACGAGcgccgatttgcctgtgatttcaggcgtTTGTCAGCGAGTCAAAAATtgaggctaaaatcatgcagtctgaactctgcttTAATAATCGaaacacaaaaaacagaaacgtTAAATAGTCAAATGATAGAAAGAAAATAGAAACAAACGTCCAGAGAAATGTTCATTTTGGCAAAACTTTAATGTAGGTGTGAGGTTGAAAGGCAGAGGAGGACAAAATAAACGAGAGTGTCAAAAAGACAAACGAAGGATACGATTGAAACATTGGGAGTCTGATAAATAAACTCGGTTACGTGTTCAGCGCTTATATACCCCTCTAAAATATTCTATACTCAAATGCTTTAATAAACTCTTTTAGGAACggaaaaatgaattaaaaccacTTCACCAGAACATAATAATAGATCACTCTGTAAAATAAAGCATGATATTAACTTAATCTGTGCCGTCTGTCCTTATACAAACAGTCCTGAACGCATTCGcaccacaaaaataaaacaaatatctgAAATCTACAACAAACCCCCTCTAACACAACACCCATTTC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097047

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064442 True 807 lncRNA 0.40 2 49919936 49921857

Neighbor

gene id symbol gene type direction distance location
XLOC_033166 atp5f1e coding downstream 17796 49893488 ~ 49902140 (-)
XLOC_033165 gnas coding downstream 46916 49811831 ~ 49873020 (-)
XLOC_033164 nelfcd coding downstream 118763 49781884 ~ 49801173 (-)
XLOC_033163 NA coding downstream 148297 49760355 ~ 49771639 (-)
XLOC_033162 apcdd1l coding downstream 246460 49650170 ~ 49673476 (-)
XLOC_033169 asip1 coding upstream 54053 49975910 ~ 49983329 (-)
XLOC_033170 raly coding upstream 99553 50021410 ~ 50204262 (-)
XLOC_033171 CU928043.1 coding upstream 213462 50135319 ~ 50135437 (-)
XLOC_033172 NA coding upstream 437800 50359657 ~ 50380212 (-)
XLOC_033173 romo1 coding upstream 479763 50401620 ~ 50404732 (-)
XLOC_033155 BX569793.1 non-coding downstream 597404 49310908 ~ 49322532 (-)
XLOC_033152 NA non-coding downstream 815744 49100879 ~ 49104192 (-)
XLOC_033149 NA non-coding downstream 970421 48914868 ~ 48949515 (-)
XLOC_033148 CU137649.1 non-coding downstream 1307786 48612034 ~ 48612150 (-)
XLOC_033174 NA non-coding upstream 536111 50457968 ~ 50505438 (-)
XLOC_033178 BX530017.2 non-coding upstream 820458 50742315 ~ 50747545 (-)
XLOC_033179 BX530017.1 non-coding upstream 832644 50754501 ~ 50756448 (-)

Expression


Co-expression Network