LOC110514652


Basic Information

Item Value
gene id LOC110514652
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 6621171 ~ 6632046 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036947941.1
GGTGCGTTCGTTTTCAGGCCTTCTGGGCGGGTTTGGAGTGGTCTTGTTATAGATAGAAATTGTATATAGACCTGGCAACCACAACAGCAGCTAGTCAGCCACCATTGTTCAGACCTGGCAACCACAACAGCAGCTAGTCAGCCACCATTGTTCAGCAGCTTTTTAACAAACATAGCAGAAACATTGGAGCCCTTTAGACACTATCTGTGATTATTAGCCATTTTGTTTTCAACACACTTTCATCGTATCTACCAGTTACCCCATTTAATAGCATATTTACGTTGTGGTTGTCAGTCAGCTAGCTGGATGGTTACATTAccactaggctagtcgctaacggtaactagctaacgttagctagataacaTCTCCGACTATGAGCTCCCTAAACTACTCCTTCCCTGCTAAAGAAGAGGAGATCGGATGGACGGAGACAGAAACTCccgtgaaagaggagaaggaagaggaggctgttacagtaaaacaagaagtagagggtGAAGCTGGTAcattgaaagaagaagagaaagaagctTTCGGAGTGAAAGAGGAGAATGATTATAccgtgaaagaagaggaggaagagaaacaaGACGATGCGttttttggagtgaaagaggagaaaGATTTTACCGTGAAAGAAGAGGTTGAAGAGAAACAAGACGATGCGTTgtttggagtgaaagaggaggcgGCCATGACAGTAAAGGTAGAGGAAGACGTTTttagagtgaaagaggaggagatgactgtctcgttggaggaagaggagactggAGATAtcattaacaccaGAAAGAGAACAGACTTTCATTCTGACAGTGGGAAGAGTCCTTCAGAGGAACCAGAGACATCCAACCCAGCAAGGCGACActgctgctcccagtgtggaaagagtttaaCTCAGTTAGGGAACTTGAAAATACATGaacgaatacacacaggagaaaagccttaccaatgctcccagtgtgggaagCGTTTTACCCTGTCAGGACACCTAAAAGTGCAtgaaagaacacacacaggtgagaagcATTTAGCAAGACCACACCActgttcccactgtggaaagCATTTTACTCAGTTAGGGAACTTAAAAATACATGaacgaatacacacaggagaaaagccttaccaatGCTCCCATTGTGGGAAGCGTTTTACCCAGTCAGGGTACTTGAGAACCCATACGAGGACACACACAAGAGAGAAACCCTAcaaatgctcccagtgtggaaagagttttacccagtCAGGACACTTGAAAGAAcataagagaacacacacaggggagaatccttaccaatgctcccagtgtgggaagCGTTTTACCCTGTCAAGTCACCTAAAAGTGCATGAAAGAACACACACGGGGGAGAAGCCTTACAAATgcgcccagtgtggaaagagctttaCCACATTAGTTCAATTGAAAGAACACAAAAGtaaacacacaggggagaagccgttccactgctcccagtgtagaACAAGTTTTACACAATCAGGAGGCCTAAAAATACACATGAGAATACACACAAAAGAGAAACCCtaccaatgctcccagtgtggaaagcgttTTGCCCGGTCAGGGCACATGAAAGAACATAAGAGAACACACAccggggagaagccttaccaatgctcccagtgtgggaagagtttcacccTGTCAGGGCACTTAAAAGTGCAtgaaagaacacacacaggggagaagccctaCCAATGCTCTCTGTGTGGAAAATGTTTTACCACATCACAGAATCTTAAAgtacatgagagaatacacacgagATAGAATCTTTACCACTACTTCCAGTGTGGaaattgatatttcacatcacatgaagagggagtggttacagAATTGATTGGACAACACCTAGTAAGAAATACTATACACGTTAAACATGTGAAATACTGTAGATATGTTATTTAAAAAATGCAACTCGAAGCTAGAAGCATCAGAGTGCCtagaaaggtagttctaacctttAAATATGACTGGGCAAAGTCATTAGTTCTAACCTTTAAATATGACTGGGCAAAGTCATTAGTTCTacccttaaatatgactgggcaaAGTCATTAGTTCTAACCTTTAAATATGACTGGGCAAAGTCATTAGTTCTacccttaaatatgactgggcaaagtcattagttctacccttaaatatgactgggcaaagtcattagttctacccttaaatatgactgggcaaagtcattagttccgcccttaaatatgactgggcaaa
>XM_036947942.1
CGTTCGTTTTCAGGCCTTCTGGGCGGGTTTGGAGTGGTCTTGTTATAGATAGAAATTGTATATAGACCTGGCAACCACAACAGCAGCTAGTCAGCCACCATTGTTCAGACCTGGCAACCACAACAGCAGCTAGTCAGCCACCATTGTTCAGCAGCTTTTTAACAAACATAGCAGAAACATTGGAGCCCTTTAGACACTATCTGTGATTATTAGCCATTTTGTTTTCAACACACTTTCATCGTATCTACCAGTTACCCCATTTAATAGCATATTTACGTTGTGGTTGTCAGTCAGCTAGCTGGATGGTTACATTAccactaggctagtcgctaacggtaactagctaacgttagctagataacaTCTCCGACTATGAGCTCCCTAAACTACTCCTTCCCTGCTAAAGAAGAGGAGATCGGATGGACGGAGACAGAAACTCccgtgaaagaggagaaggaagaggaggctgttacagtaaaacaagaagtagagggtGAAGCTGGTAcattgaaagaagaagagaaagaagctTTCGGAGTGAAAGAGGAGAATGATTATAccgtgaaagaagaggaggaagagaaacaaGACGATGCGttttttggagtgaaagaggagaaaGATTTTACCGTGAAAGAAGAGGTTGAAGAGAAACAAGACGATGCGTTgtttggagtgaaagaggaggcgGCCATGACAGTAAAGGTAGAGGAAGACGTTTttagagtgaaagaggaggagatgactgtctcgttggaggaagaggagactggAGATAtcattaacaccaGAAAGAGAACAGACTTTCATTCTGACAGTGGGAAGAGTCCTTCAGAGGAACCAGAGACATCCAACCCAGCAAGGCGACActgctgctcccagtgtggaaagagtttaaCTCAGTTAGGGAACTTGAAAATACATGaacgaatacacacaggagaaaagccttaccaatgctcccagtgtgggaagCGTTTTACCCTGTCAGGACACCTAAAAGTGCAtgaaagaacacacacagGGCCGATTGgaaaaagctgttcaaaagaggacaaCGTATTAACATTTCTCTGTACTCCCTGACGAAAGCCGTGCAGCCGAAACGtgtgaaatatttttttaaactttgtttccaattgaacatgccatacaaataaagctat

Function

NR:

description
PREDICTED: zinc finger protein 2 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036947941.1 False 2263 mRNA 0.43 2 6621171 6630686
XM_036947942.1 True 1166 mRNA 0.44 3 6621175 6632046

Neighbor

gene id symbol gene type direction distance location
LOC110511216 LOC106564015 coding upstream 25935 6586931 ~ 6595236 (+)
LOC118940005 LOC106593103 coding upstream 42289 6523504 ~ 6578882 (+)
LOC118940019 NA coding upstream 105608 6514024 ~ 6515563 (+)
LOC118940067 NA coding upstream 152608 6449002 ~ 6468563 (+)
LOC118940066 NA coding upstream 181402 6430118 ~ 6439769 (+)
LOC110514651 LOC106595305 coding downstream 4060 6636106 ~ 6660778 (+)
LOC118940231 NA coding downstream 14561 6646607 ~ 6648168 (+)
LOC118940233 NA coding downstream 22422 6654467 ~ 6656974 (+)
LOC118940246 NA coding downstream 733890 7365617 ~ 7381649 (+)
LOC110485353 LOC106596877 coding downstream 905245 7537291 ~ 7543177 (+)
G1416405 NA non-coding upstream 7869 6605003 ~ 6613302 (+)
G1416394 NA non-coding upstream 53788 6566940 ~ 6567383 (+)
G1416346 NA non-coding upstream 282642 6337839 ~ 6338529 (+)
G1416342 NA non-coding upstream 291481 6328428 ~ 6329690 (+)
G1416338 NA non-coding upstream 319124 6301763 ~ 6302047 (+)
G1416429 NA non-coding downstream 45736 6677782 ~ 6683556 (+)
G1416439 NA non-coding downstream 73076 6705122 ~ 6706588 (+)
G1416451 NA non-coding downstream 87525 6719571 ~ 6720681 (+)
G1416453 NA non-coding downstream 92869 6724915 ~ 6754655 (+)
G1416180 LOC106594343 other upstream 403918 6216219 ~ 6217253 (+)
G1416304 NA other upstream 451624 6168395 ~ 6169547 (+)
LOC110493338 LOC106590982 other upstream 555714 6056654 ~ 6066070 (+)
G1415943 NA other upstream 1451598 5168936 ~ 5169573 (+)
G1416452 NA other downstream 87741 6719787 ~ 6720394 (+)
G1416462 NA other downstream 120756 6752802 ~ 6769590 (+)
G1416559 NA other downstream 696009 7328055 ~ 7334299 (+)
G1417359 LOC106594003 other downstream 970709 7602755 ~ 7606668 (+)
G1417508 NA other downstream 1065881 7697927 ~ 7698422 (+)

Expression


Co-expression Network