XLOC_033169 (asip1)


Basic Information

Item Value
gene id XLOC_033169
gene name asip1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 49975910 ~ 49983329 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064443
GGGGAATATCTCCAGCCAGCTTCACAAAGGGAAAACTGGGGGCCTCAGTACTCACAAGGACAGGGTGAAGTGTTAATATGAGTCCGTCATTGTGGCTGTGCTGTGTGCTGCTCTGTTTAGTCTGCTGTGTCACggtgcacacacacatgccaatGGAGGAACAGCACAGCTCCAACCAAAGCAACAGCAACTTACTAGCAAACAACCAAACAGATGCACCTCCTGTGCTCATAATCGGGCTTTCAAAAACACCCAAGAAGAGCAAGAAATCAGAAAAGAAGCCAAAAAAGAAATTCCCCAATAAAGTGAAGAGACCCCCGCCTCCGCCGAACTGTGTGCCCCTGTGGGCGAGCTGCAAGAGCCCGAACGCGGTGTGCTGCGATCAGTGCGCTTTCTGCCACTGCCGCCTGCTCAAAACAGTCTGCTACTGCCGCATGGGATACCCCAAATGCTGAGGAGGACCACCAGACTCACCCCATCCTGTTTATGGAGCCCTGCGGGATTATGACCGGCGATAATCTCTCGCACtgcatcattatttttataacCGCGGTCAGATTTTCTCGGAGTTTTTCCTGACCAGATAAACCTGAGGCGCACGGCGGGAAAACACATGCAGACACCTGGGTACTTAAAATCACCTTATGATTATTACTTATATTATGGGTAATATTATAGGAAGAATATTCTTGTTTATACGGTGACTTTTTTTGGTTGTATGCACTTTA

Function

symbol description
asip1 Predicted to enable melanocortin receptor binding activity and neuropeptide hormone activity. Acts upstream of or within pigmentation. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in several structures, including fat cell; integument; liver; opercle; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in type 2 diabetes mellitus. Orthologous to human ASIP (agouti signaling protein).

GO:

id name namespace
GO:0032438 melanosome organization biological_process
GO:0048023 positive regulation of melanin biosynthetic process biological_process
GO:0043473 pigmentation biological_process
GO:0009755 hormone-mediated signaling pathway biological_process
GO:0005576 extracellular region cellular_component
GO:0005615 extracellular space cellular_component
GO:0031779 melanocortin receptor binding molecular_function
GO:0005102 signaling receptor binding molecular_function
GO:0005184 neuropeptide hormone activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060215-1 Predicted to enable melanocortin receptor binding activity and neuropeptide hormone activity. Acts upstream of or within pigmentation. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in several structures, including fat cell; integument; liver; opercle; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in type 2 diabetes mellitus. Orthologous to human ASIP (agouti signaling protein).

Ensembl:

ensembl_id ENSDARG00000077858

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064443 True 728 mRNA 0.48 4 49975910 49983329

Neighbor

gene id symbol gene type direction distance location
XLOC_033167 BX629346.2 coding downstream 49593 49918254 ~ 49926317 (-)
XLOC_033168 BX629346.1 coding downstream 54053 49919936 ~ 49921857 (-)
XLOC_033166 atp5f1e coding downstream 73770 49893488 ~ 49902140 (-)
XLOC_033165 gnas coding downstream 102890 49811831 ~ 49873020 (-)
XLOC_033164 nelfcd coding downstream 174737 49781884 ~ 49801173 (-)
XLOC_033170 raly coding upstream 38081 50021410 ~ 50204262 (-)
XLOC_033171 CU928043.1 coding upstream 151990 50135319 ~ 50135437 (-)
XLOC_033172 NA coding upstream 376328 50359657 ~ 50380212 (-)
XLOC_033173 romo1 coding upstream 418291 50401620 ~ 50404732 (-)
XLOC_033174 NA coding upstream 474639 50457968 ~ 50505438 (-)
XLOC_033163 NA non-coding downstream 204271 49760355 ~ 49771639 (-)
XLOC_033155 BX569793.1 non-coding downstream 653378 49310908 ~ 49322532 (-)
XLOC_033152 NA non-coding downstream 871718 49100879 ~ 49104192 (-)
XLOC_033178 BX530017.2 non-coding upstream 758986 50742315 ~ 50747545 (-)
XLOC_033179 BX530017.1 non-coding upstream 771172 50754501 ~ 50756448 (-)

Expression


Co-expression Network