Item | Value |
---|---|
gene id | XLOC_033170 |
gene name | raly |
gene type | coding |
species | zebrafish (Danio rerio) |
category of species | model fish |
Item | Value |
---|---|
chromosome id | NC_007117.7 |
NCBI id | CM002890.2 |
chromosome length | 60270059 |
location | 50021410 ~ 50204262 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
symbol | description |
---|---|
raly | Predicted to enable RNA binding activity. Predicted to be active in nucleus. Is expressed in central nervous system; heart rudiment; and neurons. Orthologous to human RALY (RALY heterogeneous nuclear ribonucleoprotein). |
id | name | namespace |
---|---|---|
GO:0005634 | nucleus | cellular_component |
GO:0003676 | nucleic acid binding | molecular_function |
GO:0003723 | RNA binding | molecular_function |
id | description |
---|---|
ko03041 | Spliceosome |
id | description |
---|---|
ZDB-GENE-041010-127 | Predicted to enable RNA binding activity. Predicted to be active in nucleus. Is expressed in central nervous system; heart rudiment; and neurons. Orthologous to human RALY (RALY heterogeneous nuclear ribonucleoprotein). |
ensembl_id | ENSDARG00000059972 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TCONS_00064444 | False | 2891 | mRNA | 0.44 | 10 | 50021410 | 50204262 |
TCONS_00064445 | False | 1531 | mRNA | 0.48 | 10 | 50022150 | 50203682 |
TCONS_00064446 | True | 1005 | mRNA | 0.52 | 8 | 50027209 | 50203682 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
XLOC_033169 | asip1 | coding | downstream | 38081 | 49975910 ~ 49983329 (-) |
XLOC_033167 | BX629346.2 | coding | downstream | 95093 | 49918254 ~ 49926317 (-) |
XLOC_033168 | BX629346.1 | coding | downstream | 99553 | 49919936 ~ 49921857 (-) |
XLOC_033166 | atp5f1e | coding | downstream | 119270 | 49893488 ~ 49902140 (-) |
XLOC_033165 | gnas | coding | downstream | 148390 | 49811831 ~ 49873020 (-) |
XLOC_033172 | NA | coding | upstream | 155395 | 50359657 ~ 50380212 (-) |
XLOC_033173 | romo1 | coding | upstream | 197358 | 50401620 ~ 50404732 (-) |
XLOC_033174 | NA | coding | upstream | 253706 | 50457968 ~ 50505438 (-) |
XLOC_033175 | mtss1 | coding | upstream | 376678 | 50580940 ~ 50685862 (-) |
XLOC_033176 | osgn1 | coding | upstream | 491119 | 50695381 ~ 50704689 (-) |
XLOC_033163 | NA | non-coding | downstream | 249771 | 49760355 ~ 49771639 (-) |
XLOC_033155 | BX569793.1 | non-coding | downstream | 698878 | 49310908 ~ 49322532 (-) |
XLOC_033152 | NA | non-coding | downstream | 917218 | 49100879 ~ 49104192 (-) |
XLOC_033178 | BX530017.2 | non-coding | upstream | 538053 | 50742315 ~ 50747545 (-) |
XLOC_033179 | BX530017.1 | non-coding | upstream | 550239 | 50754501 ~ 50756448 (-) |
XLOC_033181 | NA | non-coding | upstream | 1324501 | 51528763 ~ 51541488 (-) |