LOC110495027 (LOC106593382)


Basic Information

Item Value
gene id LOC110495027
gene name LOC106593382
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 8889782 ~ 8908924 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036948808.1
ATGAGTACGGACGCGGAGATGCAGATCTACGGCAAGGCTGCCATATACCTCCGTAAgcctgagagggagaggattgaGGCACAAACCGCACCCTTTGATTCAAAGAACTCCTGCTACGTGACAGACAAGGTGGAGCTGTACCTTAAGGGTCTGGTCACTGCCAGGGCCGACGGGAAGTGTACTGTAACAGTCACAAAACCTGACGGCACTAAGGAGGAAGGAAAAGAGTTCAAAGATGCAGACATCTATGAGATGAACCCCCCTAAGTACGACAAGATTGAGGACATGGCCATGATGACCTACCTGAATGAAGCCTCTGTGTTGTATAACCTCAAAGAGCGTTATGCAGCATGGATGATCTATACCTACTCTGGGCTCTTCTGTGCCACGGTGAACCCCTACAAGTGGCTCCCCGTATACGACATGGAGGTTGTCAACGCCtacagagggaagaagaggatggAGGCTCCACCCCATATTTTCTCAGTCTCTGACAATGCCTTTCAGTTCATGCTGATTGataaggAGAACCAGTCCGTCCTGATTACCGGAGAATCCGGTGCAGGAAAGACTGTCAACACCAAGCGTGTCATCCAGTACTTTGCCACCATTGCAGTGTCtggtggagagaagaagaaggaagtAGACCCCAGCAAAATGCAGGGGTCTCTTGAGGATCAGATCATTGCAGCTAACCCTCTGCTGGAGGCTTATGGTAATGCCAAGACAGTGAGGAATGACAACTCGTCTCGCTTTGGTAAATTCATCAGGATTCACTTCCAAGGTGGTAAACTGGCTAAAGCTGACATTGAGACCTaccTGCTGGAGAAGTCCAGAGTGTCCTTCCAGCTGCCCGATGAGAGAGGCTACCACATCTTCTTCCAGATGATGACAGGCCACAAACCTGACATAGTTGAATTGGCGCTCATCACCACCAACCCCTACGACTTCCCCATGTGCAGTCAGGGTCAGATCACTGTGGCAAGCATCAACGACAATGAAGAGCTGGATGCCACAGATGATGCTATTACCATCCTGGGCTTCACTAATGAAGAGAAGCAGGCCATCTACAAGCTGACAGGAGCTGTAGTGCACCATGGAAACTTGAAATTCAAGCAGAAGCAACGTGAGGAGCAGGCCGAGCCAGACGGCACAGAGGTGGCTGATAAAATCGCCTACCTGCTGGGCCTGAACTCAGCTGAGATGTTGAAGGCTCTGTGCTACCCCAGAGTGAAGGTCGGCAACGAGTATGTGACCAAGGGACAGACTGTGCCTCAGGTTAATAACTCAGTCAGTGCTCTGGCCAAGTCCATCTATGAGAGGATGTTCTTGTGGATGGTCATCCGTATCAATGAGATGTTGGACACAAAGCAGCCAAGGCAGTTCTATATCGGTGTGCTTGACATTGCCGGGTTTGAGATCTTTGATTACAACAGCATGGAGCAGCTGTGCATCAACTTCACCAATGAGAAACTGCAacagtttttcaaccacaccatgtTCGTCCTGGAGCAAGAGGAGTACAAGAAGGAGGGAATCGTCTGGGCCTTCATTGACTTCGGCATGGACTTGGCTGCCTGCATTGAGCTTATTGAGAAGCCATTGGGCATCTTCTCCATCCTTGAAGAGGAGTGCATGTTCCCTAAGTCTTCAGACACTACCTTCAAGGACAAGCTGTACTCCCAGCATCTTGGCAAAACAAAGGCGTTTGAGAAGCCCAAGCCTGCCAAAGGCAAGGCAGAGGCCCACTTCTCCCTGGTGCACTACGCCGGCACTGTGGACTACAACATCACTGGGTGGCTGGAGAAGAACAAGGACCCCCTGAACGACTCAGTTTGTCAACTGTACGGGAAGTCCTCAGTCAAACTTTTGGCTGCCCTGTATCCTGCTGCCCCACCTGAGGATACAACCAAGAAAGGAGGCAAGAAGAAGGGTGGTTCCATGCAGACTGTGTCCTCCCAGTTCAGGGAGAACTTACATAAGCTGATGACCAACTTGAGGAGCACTCATCCTCACTTTGTGCGCTGCCTGATCCCCAACGAGTCAAAGACTCCAGGTCTGATGGAGAACTTCCTGGTTATCCACCAGCTCAGGTGTAATGGTGTACTGGAGGGTATCAGGATCTGCAGAAAGGGATTCCCCAGCAGAATCATCTATGCTGATTTCAAGCAGAGGTACAAAGTACTGAATGCCAGCGTCATCCCCGAGGGCCAGTTCATGGACAACAAGAAGGCTTCTGAGAAGCTGCTTGGgtccattgatgtgaatcacgaggattacaagtttggacacaccaagGTGTTCTTCAAAGCCGGTCTGCTGGGTgtcctggaggagatgagagatgagaagcTGGCCACTCTAGTCGGCATGGTCCAGGCTCTCAGCCGTGGATTCCTCATGAGGAGAGAGTTCACcaagatgatggagaggagAGAATCAATTTACTCCATCCAGTACAACATCCGCTCATTCATGAATGTGAAAACCTGGCCATGGATGAAGTTGTACTTCAAGATCAAGCCCCTGCTGCAGAGCGCTGAGACTGAGAAGGAGCTGGCCAACATGAAGGAGAACTATGAGAAGATGACGACAGACCTGGCCAAGGCTCTGGCCACAAAGAAGCAAATGGAGGAGAAGTTGGTGGCCCTGACGCAGGAGAAGAACGACCTGGCGCTCCAAGTCGCGTCTGAAGGAGAGAGTCTGAACGATGCTGAGGAAAGGTGTGAGGGGCTCATCAAGAGCAAGATCCAGCTGGAGGCCAAACTCAAAGAGACGACCGAGaggctggaggatgaggaggagatcaATGCTGAGTTGACTGCAAAGAAGAGGAAGCTGGAAGATGAGTGTTCTGAGCTGAAGAAGGACATTGATGACCTGGAGCTCACCCTGGCCAAAGTGGAGAAGGAGAAGCACGCCACTGAAAACAAGGTTAAAAACCTGACAGAGGAGATGGCGTCTATGGATGAGAGTGTTGCCAAGCTGACCAAGGAGAAGAAAGCCCTCCAAGAGGCCCACCAGCAGACACTGGATgacctgcaggcagaggaggacaAAGTCAACACTCTGACCAAGGCCAAGACCAAGCTGGAACAGCAAGTGGACGACCTTGAGGGTTCTCTGGAGCAAGAGAAGAAGCTCCGTATGGACCTTGAGAGAGCCAAGAGAAAGCTGGAGGGAGATCTGAAACTGGCCCAGGAGTCCATAATGGACCTGGAGAATGACAAGCAGCAAGCTGATGAGAAAATCAAGAAGAAGGAGTTTGAGACCACCCAGCTCCTCAGCAAGATTGAGGATGAGCAGTCTCTGGGAGCTCAGCTGCAGAAGAAGATCAAGGAACTCcagGCCCGTattgaggagctggaggaggaaatTGAGGCTGAGCGTGCTGCCAGGGCTAAGGTTGAGAAGCAGAGGGCCGATCTCTCCAGGGAACTTGAGGAGATCAGCGAGAGGCTGGAGGAGGCCGGAGGCGCCACTGCTGCTCAGATTGAGATGAACAAGAAGCGTGAGGCTGAGTTCCAGAAGCTGCGTCGTGATCTCGAAGAGTCCACCCTGCAGCATGAGGCCACAGCCGCCGCTCTGCGCAAGAAGCAGGCCGACAGTGTGGCTGAGCTCGGGGAGCAGATCGACAACCTGCAGCGCGTTAAGCagaagctggagaaggagaagagcgaGTACAAGATGGAGATTGATGACCTCTCCAGCAACATGGAGGCCGTCGCCAAGGCTAAGGGCAATCTGGAGAAGATGTGCCGTACTCTTGAGGACCAGCTGAGTGAGCTCAAGACTAAGAATGATGAGAATGTTCGCCAGATCAACGACATCAGCGGACAGAGGGCCAGACTCCTGACAGAAAATGGTGAGTTTGGCCgccagctggaggagaaggaaGCCCTGGTGTCTCAGCTGACCAGAGGAAAACAGGCCTTCACCCagcaggtggaggagctgaagaggGCGACTGAGGAGGAGGTCAAGgcTAAAAATGCACTGGCCCACGGTGTCCAGTCTGCCCGCCATGACTGTGACCTCCTGAGGGAGCAGtttgaggaggagcaggaggccaAGGCAGAGCTGCAACGCGGCATGTCCAAGGCCAACAGTGAGGTGGCTCAGTGGAGGACTAAGTATGAAACTGATGCCATCCAGCGcacagaggagctggaggaggccaAGAAGAAGCTGGCTCAGCGTCTGCAGGAGGCGGAGGAGACCATTGAGGCGACCAACTCCAAGTGCGCCTCCCTGGAGAAGACCAAGCAGAGGctgcagggagaggtggaggacctCATGATTGATGTTGAGAGAGCCAACGCATTGGCCGCCAACCTCGACAAGAAGCAGAGGAACTTTGACAAGGTTCTGGCAGAGTGGAAGCAGAAGTATGAGGAGGGCCAGGCTGAGCTGGAAGGAGCTCAGAAGGAGGCTCGCTCTATGAGCACTGAACTCTTCAAGATGAAGAACTCCTACGAGGAGGCTCTGGATCATCTGGAGACTCTGAAGAGAGAAAACAAGAACCTGCAACaggaGATCTCTGACCTGACTGAGCAGATTGGAGAGACTGGCAAGAGCATCCATGAGCTGGAGAAGGCCAAGAAGACCGTGGAGACAGAGAAGTCTGAGATCCAGACTGCTCTGGAGGAGGCTGAGGGAACACTGGAGCACGAGGAATCCAAGATTCTGCGTGTGCAGCTGGAGCTGAACCAGATCAAGGGTGAGGTGGACAGGAAGATTGCTGAGAAGGATGAGGAGATGGAGCAGATCAAGAGGAACAGCCAGAGGGTGGTTGACTCCATGCAGAGCACCCTGGACTCTGAGGTCAGGAGCAGGAATGATGCCCTGAGggtgaagaagaagatggagggagacctGAACGAGATGGAGATCCAGCTGAGCCACTCCAACAGGCAGGCCGCTGAGGCCCAGAAACAGCTGAGGAATGTCCAGGGACAGCTCAAGGATGCCCAATTGCACCTTGATGACGCCGTCCGTGTCGCAGAAGACATGAAGGAGCAGGCAGCCATGGTGGAGCGCAGAAACGGCCTGATGTTGGCTGAAATCGAGGAGCTGAGAGTTGCtctggagcagacagagagaggccgcAAAGTGGCTGAGACTGAGCTGGTAGACGCCAGCGAGCGTGTTGGACTGCTGCACTCCCAGAACACCAGCCTTCTGAACACCAAGAAGAAGCTGGAGACTGACCTGGTGCAGgtgcagggagaggtggaggacatCGTCCAGGAGGCCAGGAATGCAGAGGAGAAGGCCAAGAAGGCAATCACTGACGCGGCCATGATGTCtgaggagctgaagaaggagcaggacaccagctctcacctggagaggatgaagaagaacctGGAGGTCACAGTCAAGGACCTGCAGCACCGCCTGGATGAGGCTGAGAATCTGGCCATGAAGGGAGGCAAGAAGCAGCTCCAGAAACTGGAGTCCAGGGTGCGTGAGCTCGAGACTGAGGTGGAGGCCGAGCAGAGAAGAGGTGCAGATGCAGTCAAAGGAGTTCGCAAGTATGAGCGCAGAGTCAAGGAGCTCACTTACCAGACTGAGGAGGATAAGAAGAATGTTAACAGACTTCAGGACCTGGTAGATAAGCTGCAGATGAAAGTGAAGGCCTACAAGAGGCATTCTGAGGAAGCGGAGGAAGCAGCAAACCAGCACATGTCTAAGTTCAGGAAGGTTCAGCATGAGCTGGAGGAGGCTGAGGAGCGTGCTGACATCGCTGAGACTCAGGTCAACAAGCTCAGAGCCAAGACCCGTGACTCGGGAAAGGGAAAAGAAGTTGCTGAATAAACAAGACCAAAGAATTGAAGATCAAAGTCTTACCATTTTCCTGTGTTGcataaaatatgattttcatggTGAAATGTTGAGCATTGATTAAAAACATGTGGATCTACA

Function

NR:

description
PREDICTED: myosin heavy chain, fast skeletal muscle-like

GO: NA

KEGG:

id description
K24220 MYH1s; myosin heavy chain 1/2/3/4/8/13/7B/15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036948808.1 True 5928 mRNA 0.53 39 8889782 8908924

Neighbor

gene id symbol gene type direction distance location
LOC110494879 NA coding upstream 53363 8832523 ~ 8836419 (+)
LOC110485370 LOC106564160 coding upstream 68619 8817375 ~ 8821163 (+)
LOC110494882 LOC106593417 coding upstream 82122 8791198 ~ 8807660 (+)
LOC110485368 LOC105027472 coding upstream 99667 8761682 ~ 8790721 (+)
LOC118940253 NA coding upstream 401196 8487647 ~ 8488586 (+)
LOC110495028 LOC106593387 coding downstream 55885 8964809 ~ 8984789 (+)
LOC110513340 LOC106593387 coding downstream 121569 9030493 ~ 9049651 (+)
LOC110519048 LOC106593387 coding downstream 177268 9086192 ~ 9109227 (+)
LOC110513772 LOC106593162 coding downstream 243212 9152136 ~ 9219692 (+)
LOC110485387 LOC106593109 coding downstream 325470 9234394 ~ 9247725 (+)
G1418141 NA non-coding upstream 21184 8855787 ~ 8868598 (+)
G1418097 NA non-coding upstream 80452 8782508 ~ 8809330 (+)
G1418108 NA non-coding upstream 88280 8800495 ~ 8801502 (+)
G1418107 NA non-coding upstream 88627 8799264 ~ 8801155 (+)
G1418076 NA non-coding upstream 179120 8709903 ~ 8710662 (+)
G1418171 NA non-coding downstream 45748 8954672 ~ 9010484 (+)
G1418175 NA non-coding downstream 78904 8987828 ~ 8994604 (+)
G1418179 NA non-coding downstream 100780 9009704 ~ 9066782 (+)
G1418184 NA non-coding downstream 149699 9058623 ~ 9084743 (+)
G1418211 NA non-coding downstream 264172 9173096 ~ 9219467 (+)
G1418037 LOC106594248 other upstream 308631 8578605 ~ 8581151 (+)
LOC110516831 LOC106593980 other upstream 399501 8452099 ~ 8491706 (+)
LOC110499479 ubl5 other upstream 497301 8384381 ~ 8392496 (+)
G1417938 NA other upstream 519272 8369841 ~ 8370510 (+)
LOC110487204 LOC106593073 other downstream 374302 9281428 ~ 9295974 (+)
LOC110510627 LOC106593081 other downstream 395643 9304567 ~ 9515031 (+)
LOC110493376 LOC106564189 other downstream 680165 9581609 ~ 9592897 (+)

Expression


Co-expression Network